RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 NOX5Q96PH1 765 aa5.3□□□□□ -1.56
CDC27-213ENST00000571643 SMOC1Q9H4F8 434 aa5.3□□□□□ -1.56
CDC27-213ENST00000571643 AQRO60306 1485 aaKnown RBP eCLIP5.3□□□□□ -1.563e-8■■■■□ 21.6
CDC27-213ENST00000571643 TDRD9Q8NDG6 1382 aaKnown RBP5.29□□□□□ -1.56
CDC27-213ENST00000571643 ERICH3Q5RHP9 1530 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 A0A1B0GTL3 188 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 TADA3O75528 432 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 ITGA1P56199 1179 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 KIAA2012Q0VF49 1180 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
CDC27-213ENST00000571643 BORAQ6PGQ7 559 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 USP53Q70EK8 1073 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 ZNF761Q86XN6 746 aaPredicted RBP5.29□□□□□ -1.56
CDC27-213ENST00000571643 TTLL11Q8NHH1 800 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.29□□□□□ -1.56
CDC27-213ENST00000571643 TMEM209Q96SK2 561 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 ADAM7Q9H2U9 754 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 SPATA6Q9NWH7 488 aaPredicted RBP5.29□□□□□ -1.56
CDC27-213ENST00000571643 MYOTQ9UBF9 498 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 FBXL7Q9UJT9 491 aa5.29□□□□□ -1.56
CDC27-213ENST00000571643 SYNJ2O15056 1496 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 TCRBV5S2A0A599 114 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 NOBOXO60393 691 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 DLX3O60479 287 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 LCP1P13796 627 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 IFRD2Q12894 506 aaPredicted RBP5.28□□□□□ -1.56
CDC27-213ENST00000571643 SPATS1Q496A3 300 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 NAALADL2Q58DX5 795 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 DENND5AQ6IQ26 1287 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 ADGRG2Q8IZP9 1017 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.28□□□□□ -1.56
CDC27-213ENST00000571643 ARMC5Q96C12 935 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 C8orf37Q96NL8 207 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 BDH2Q9BUT1 245 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 LNPKQ9C0E8 428 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 SLC6A20Q9NP91 592 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 PBRM1Q86U86 1689 aa5.28□□□□□ -1.56
CDC27-213ENST00000571643 C9orf118A6NHY6 69 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 FHAD1B1AJZ9 1412 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 ARNTLO00327 626 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 NAT1P18440 290 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 GRK2P25098 689 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 GRK3P35626 688 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 GRIA2P42262 883 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 GPR85P60893 370 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 PLP2Q04941 152 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 SPIRE1Q08AE8 756 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 RTP5Q14D33 572 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 STYK1Q6J9G0 422 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 NSMFQ6X4W1 530 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 DBX2Q6ZNG2 339 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 PLEKHH3Q7Z736 793 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 KIF27Q86VH2 1401 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 LGI4Q8N135 537 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 IPO9Q96P70 1041 aaKnown RBP5.27□□□□□ -1.57
CDC27-213ENST00000571643 ARHGEF4Q9NR80 690 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 HSPBP1Q9NZL4 362 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 ASH2LQ9UBL3 628 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
CDC27-213ENST00000571643 SNAPC4Q5SXM2 1469 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 K7ESM1 405 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 PDPK1O15530 556 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 PRODHO43272 600 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 PABPC1P11940 636 aaKnown RBP5.26□□□□□ -1.57
CDC27-213ENST00000571643 CNR2P34972 360 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 STAT5AP42229 794 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 RASGRF1Q13972 1273 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 SURF1Q15526 300 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 SKOR2Q2VWA4 1001 aaPredicted RBP5.26□□□□□ -1.57
CDC27-213ENST00000571643 RGL3Q3MIN7 710 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 TEPPQ6URK8 271 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 LBX2Q6XYB7 198 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 PRRT2Q7Z6L0 340 aaPredicted RBP5.26□□□□□ -1.57
CDC27-213ENST00000571643 IFNL3Q8IZI9 196 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 FAM26EQ8N5C1 309 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 ALG1Q9BT22 464 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 HIRIP3Q9BW71 556 aaPredicted RBP5.26□□□□□ -1.57
CDC27-213ENST00000571643 TANGO6Q9C0B7 1094 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 CCDC113Q9H0I3 377 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 SIRPGQ9P1W8 387 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 PPP1R1BQ9UD71 204 aaPredicted RBP5.26□□□□□ -1.57
CDC27-213ENST00000571643 CHD1O14646 1710 aa5.26□□□□□ -1.57
CDC27-213ENST00000571643 MROH6A6NGR9 719 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 AQP7O14520 342 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 APPP05067 770 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 ADRB1P08588 477 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 GNAT1P11488 350 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 ZNF28P17035 718 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 ADAM9Q13443 819 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 MTERF2Q49AM1 385 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 PRR31Q5SQ13 230 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 PRAMEF18Q5VWM3 479 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 OTOP3Q7RTS5 596 aa5.25□□□□□ -1.57
CDC27-213ENST00000571643 MAMDC2Q7Z304 686 aaPredicted RBP5.25□□□□□ -1.57
CDC27-213ENST00000571643 ARRDC4Q8NCT1 418 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms