RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
LITAF-206ENST00000571277 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 XRRA1Q6P2D8 792 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 TMTC3Q6ZXV5 915 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 GPR20Q99678 358 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 TUT1Q9H6E5 874 aaKnown RBP13.08□□□□□ -0.32
LITAF-206ENST00000571277 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
LITAF-206ENST00000571277 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
LITAF-206ENST00000571277 EPOPA6NHQ4 379 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 SMIM10L2AP0DMW4 78 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 SMIM10L2BP0DMW5 78 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 KCNA4P22459 653 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 IGFBP4P22692 258 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 DEFB103AP81534 67 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
LITAF-206ENST00000571277 TAP1Q03518 808 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 FUT2Q10981 343 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
LITAF-206ENST00000571277 NEDD9Q14511 834 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 TSGA10IPQ3SY00 556 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 CNKSR3Q6P9H4 555 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 SPRED2Q7Z698 418 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
LITAF-206ENST00000571277 TRIM50Q86XT4 487 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 SENP7Q9BQF6 1050 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 USP26Q9BXU7 913 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 RNPEPQ9H4A4 650 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
LITAF-206ENST00000571277 RFXAPO00287 272 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 ITGB5P18084 799 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 POU3F3P20264 500 aaPredicted RBP13.06□□□□□ -0.32
LITAF-206ENST00000571277 ADAM17P78536 824 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
LITAF-206ENST00000571277 UBE2SQ16763 222 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 CUL5Q93034 780 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
LITAF-206ENST00000571277 NCOR1O75376 2440 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
LITAF-206ENST00000571277 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 C17orf102A2RUQ5 167 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 NOP56O00567 594 aaKnown RBP13.05□□□□□ -0.32
LITAF-206ENST00000571277 TREHO43280 583 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 ATP9AO75110 1047 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 KCNA2P16389 499 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 KCNJ6P48051 423 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 TJAP1Q5JTD0 557 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 ATP6V0A1Q93050 837 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 GPRASP2Q96D09 838 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
LITAF-206ENST00000571277 RSPH10B2B2RC85 870 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 TLL1O43897 1013 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 LGR5O75473 907 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 RSPH10BP0C881 870 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 THPOP40225 353 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 DHX32Q7L7V1 743 aaKnown RBP13.04□□□□□ -0.32
LITAF-206ENST00000571277 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
LITAF-206ENST00000571277 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
LITAF-206ENST00000571277 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 MTCH2Q9Y6C9 303 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 SIP14410 1827 aa13.04□□□□□ -0.32
LITAF-206ENST00000571277 BDP1A6H8Y1 2624 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 LPXNO60711 386 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 EFCAB14O75071 495 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 CDC45O75419 566 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 GJB5O95377 273 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 SP4Q02446 784 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 IKBKEQ14164 716 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 KRT40Q6A162 431 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 GIMAP8Q8ND71 665 aaPredicted RBP13.03□□□□□ -0.32
LITAF-206ENST00000571277 DBF4BQ8NFT6 615 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
LITAF-206ENST00000571277 KCNB2Q92953 911 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
LITAF-206ENST00000571277 PCDHA6Q9UN73 950 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms