RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 GIMAP8Q8ND71 665 aaPredicted RBP19.39■□□□□ 0.69
RPAIN-208ENST00000571043 BLOC1S4Q9NUP1 217 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 BTBD7Q9P203 1132 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 CTNND2Q9UQB3 1225 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 STK24Q9Y6E0 443 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 GCOM1H8Y6P7 765 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-208ENST00000571043 POLR2MP0CAP2 368 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 GCLCP48506 637 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-208ENST00000571043 STX17P56962 302 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 STIM1Q13586 685 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 LARP4BQ92615 738 aaKnown RBP19.38■□□□□ 0.69
RPAIN-208ENST00000571043 RAD54LQ92698 747 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 CTAGE1Q96RT6 745 aa19.38■□□□□ 0.69
RPAIN-208ENST00000571043 RAVER2Q9HCJ3 691 aaKnown RBP19.38■□□□□ 0.69
RPAIN-208ENST00000571043 CNMDO75829 334 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 ALDH1A1P00352 501 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 PRCPP42785 496 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 COBLL1Q53SF7 1204 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 ETNPPLQ8TBG4 499 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
RPAIN-208ENST00000571043 NELFBQ8WX92 580 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 FAM20AQ96MK3 541 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 NT5C3AQ9H0P0 336 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 EHMT1Q9H9B1 1298 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 TXNRD2Q9NNW7 524 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 GDAQ9Y2T3 454 aa19.37■□□□□ 0.69
RPAIN-208ENST00000571043 A0A1B0GTH6 734 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 PVALEFA0A1B0GWK0 134 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 STAT3P40763 770 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 ASIC1P78348 528 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 SPAG1Q07617 926 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 ARID5BQ14865 1188 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 TAF1CQ15572 869 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-208ENST00000571043 TPD52L1Q16890 204 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-208ENST00000571043 DHTKD1Q96HY7 919 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-208ENST00000571043 NUDT12Q9BQG2 462 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 TEX13BQ9BXU2 312 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 EXOC1Q9NV70 894 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 INTS13Q9NVM9 706 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 CCPG1Q9ULG6 757 aa19.36■□□□□ 0.69
RPAIN-208ENST00000571043 HOXA13P31271 388 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 CCZ1BP86790 482 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 CCZ1P86791 482 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 NR1I3Q14994 352 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 Q3C1V9 767 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 PRR16Q569H4 304 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 LENG9Q96B70 501 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 SPATC1LQ9H0A9 340 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 RIPK3Q9Y572 518 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 CEP350Q5VT06 3117 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 ADGRA2Q96PE1 1338 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 PSMA7O14818 248 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 CA12O43570 354 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 NRDCO43847 1150 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 TLR2O60603 784 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 PEX10O60683 326 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 SKILP12757 684 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 SFPQP23246 707 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 PDE4DQ08499 809 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 MCM6Q14566 821 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 SNRNP48Q6IEG0 339 aaKnown RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 UNC13DQ70J99 1090 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 APTXQ7Z2E3 356 aaKnown RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 RIOX2Q8IUF8 465 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 C17orf53Q8N3J3 647 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 PAGR1Q9BTK6 254 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 ZFYVE28Q9HCC9 887 aa19.35■□□□□ 0.69
RPAIN-208ENST00000571043 LIMA1Q9UHB6 759 aaKnown RBP19.35■□□□□ 0.69
RPAIN-208ENST00000571043 MYMKA6NI61 221 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 LRRC10BA6NIK2 292 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 FAM86B1E9PN63 330 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 CFBP00751 764 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 FAM86B2P0C5J1 330 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ALAS1P13196 640 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 CCT6AP40227 531 aaKnown RBP19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ERVK-9P63128 1117 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ERVK-24P63145 666 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 PLS1Q14651 629 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 TKFCQ3LXA3 575 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 FILIP1LQ4L180 1135 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 HSP90AA4PQ58FG1 418 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 HAUS3Q68CZ6 603 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ARMCX5Q6P1M9 558 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ANKRD13CQ8N6S4 541 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 GPRC5AQ8NFJ5 357 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ERMNQ8TAM6 284 aa19.34■□□□□ 0.69
RPAIN-208ENST00000571043 ZNFX1Q9P2E3 1918 aaKnown RBP19.33■□□□□ 0.69
RPAIN-208ENST00000571043 ZNF76P36508 570 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 TBX2Q13207 712 aaPredicted RBP19.33■□□□□ 0.68
RPAIN-208ENST00000571043 ECM1Q16610 540 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 FAM110CQ1W6H9 321 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 SPECC1LQ69YQ0 1117 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 C17orf99Q6UX52 265 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 FCHSD1Q86WN1 690 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 ANKRD20A12PQ8NF67 263 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 NOC3LQ8WTT2 800 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms