RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 LEXMQ3ZCV2 418 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 PHKBQ93100 1093 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
CCDC40-205ENST00000571028 MPHOSPH6Q99547 160 aaKnown RBP15.31■□□□□ 0.04
CCDC40-205ENST00000571028 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 LIMCH1Q9UPQ0 1083 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 PTPDC1A2A3K4 754 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 LCHNA4D1U4 455 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 NFIBO00712 420 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 KPNA6O60684 536 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 WDR5P61964 334 aaKnown RBP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 NHLH1Q02575 133 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 PTPN11Q06124 597 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 PUS10Q3MIT2 529 aaKnown RBP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 PTCRAQ6ISU1 281 aaPredicted RBP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 HEATR3Q7Z4Q2 680 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 SPRED2Q7Z698 418 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 CNTNAP5Q8WYK1 1306 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.04
CCDC40-205ENST00000571028 MTMR8Q96EF0 704 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 SNX27Q96L92 541 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 KCNH6Q9H252 994 aa15.3■□□□□ 0.04
CCDC40-205ENST00000571028 ABCB11O95342 1321 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 PFKFB2O60825 505 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 CALML3P27482 149 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 SMARCA1P28370 1054 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
CCDC40-205ENST00000571028 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 AFAP1L1Q8TED9 768 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
CCDC40-205ENST00000571028 MRPL11Q9Y3B7 192 aaKnown RBP15.29■□□□□ 0.04
CCDC40-205ENST00000571028 NKRFO15226 690 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 DCXO43602 365 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 IL9P15248 144 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 ALDH5A1P51649 535 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 SSRP1Q08945 709 aaKnown RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 FUT2Q10981 343 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 PTGISQ16647 500 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 MORC4Q8TE76 937 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 TBC1D5Q92609 795 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 FBXL18Q96ME1 805 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 PURBQ96QR8 312 aaKnown RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 RAD9AQ99638 391 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 SUGCTQ9HAC7 445 aa15.28■□□□□ 0.04
CCDC40-205ENST00000571028 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
CCDC40-205ENST00000571028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-205ENST00000571028 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.04
CCDC40-205ENST00000571028 CFBP00751 764 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 IFNAR1P17181 557 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 ERVK-21P61565 698 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 PDE4DQ08499 809 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 NTRK3Q16288 839 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 SLC30A10Q6XR72 485 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 EP400NLQ6ZTU2 488 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 TRIM22Q8IYM9 498 aa15.27■□□□□ 0.04
CCDC40-205ENST00000571028 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-205ENST00000571028 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
CCDC40-205ENST00000571028 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
CCDC40-205ENST00000571028 NID2Q14112 1375 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 LOC102724159A0A0B4J2E5 919 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
CCDC40-205ENST00000571028 EFCAB14O75071 495 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 GJB5O95377 273 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 SELPP16109 830 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 FOSBP53539 338 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 DEFB103AP81534 67 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 TRAF1Q13077 416 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 PWP2Q15269 919 aaKnown RBP15.26■□□□□ 0.03
CCDC40-205ENST00000571028 PTPROQ16827 1216 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 WWC2Q6AWC2 1192 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 FAM117BQ6P1L5 589 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 FBXO22Q8NEZ5 403 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
CCDC40-205ENST00000571028 ABHD14A-ACY1A0A1B0GW23 586 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 GRXCR2A6NFK2 248 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 CDKL5O76039 1030 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 SCG2P13521 617 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-205ENST00000571028 NAPAP54920 295 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
CCDC40-205ENST00000571028 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-205ENST00000571028 RBM47A0AV96 593 aaKnown RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 A6NJR5 290 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 B4DLN1 442 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms