RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 OR52Z1P0C646 297 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 ECHS1P30084 290 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 E2F5Q15329 346 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 UAP1Q16222 522 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 TXNRD1Q16881 649 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 CCT6BQ92526 530 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 PBKQ96KB5 322 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 CALR3Q96L12 384 aaKnown RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 TRIM6Q9C030 488 aaPredicted RBP16.92■□□□□ 0.3
SMG6-207ENST00000570756 TANGO6Q9C0B7 1094 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
SMG6-207ENST00000570756 KLRC1P26715 233 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 SLC8A3P57103 927 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 RNASE9P60153 205 aaKnown RBP16.91■□□□□ 0.3
SMG6-207ENST00000570756 SLC18A3Q16572 532 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 TLDC1Q6P9B6 456 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 GUF1Q8N442 669 aaKnown RBP16.91■□□□□ 0.3
SMG6-207ENST00000570756 OR2W6PQ8NHA6 318 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 UBLCP1Q8WVY7 318 aaPredicted RBP16.91■□□□□ 0.3
SMG6-207ENST00000570756 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 TSG101Q99816 390 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMG6-207ENST00000570756 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 KAT6BQ8WYB5 2073 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 IL2RBP14784 551 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 KIAA0753Q2KHM9 967 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 ANKS4BQ8N8V4 417 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 NOVA2Q9UNW9 492 aaKnown RBP16.91■□□□□ 0.3
SMG6-207ENST00000570756 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
SMG6-207ENST00000570756 A0A0G2JS52 829 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 PVALEFA0A1B0GWK0 134 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 KCNK3O14649 394 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 NMT2O60551 498 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 NEBLO76041 1014 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 BYSLQ13895 437 aaKnown RBP16.9■□□□□ 0.3
SMG6-207ENST00000570756 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 FAXDC2Q96IV6 333 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 PACSIN2Q9UNF0 486 aaPredicted RBP16.9■□□□□ 0.3
SMG6-207ENST00000570756 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
SMG6-207ENST00000570756 FOXR2Q6PJQ5 311 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 UNC13DQ70J99 1090 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 CHMP6Q96FZ7 201 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 PSMD1Q99460 953 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
SMG6-207ENST00000570756 USP17L12C9JPN9 530 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 USP17L21D6R901 530 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 ATP2C2O75185 946 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 ATP6V1G2O95670 118 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 GNAQP50148 359 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 MAGOHP61326 146 aaKnown RBP16.89■□□□□ 0.29
SMG6-207ENST00000570756 FAM83BQ5T0W9 1011 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
SMG6-207ENST00000570756 PROM2Q8N271 834 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 CCDC197Q8NCU1 140 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 TBC1D5Q92609 795 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 HPS3Q969F9 1004 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 MAGOHBQ96A72 148 aaKnown RBP16.89■□□□□ 0.29
SMG6-207ENST00000570756 CENPTQ96BT3 561 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 BTNL10A8MVZ5 291 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 CCDC188H7C350 402 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 TRIM37O94972 964 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 GSTA1P08263 222 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 DRD4P21917 467 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 ELF3P78545 371 aaPredicted RBP16.89■□□□□ 0.29
SMG6-207ENST00000570756 PPP2R5AQ15172 486 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 CUL5Q93034 780 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMG6-207ENST00000570756 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.29
SMG6-207ENST00000570756 CNOT8Q9UFF9 292 aaKnown RBP16.89■□□□□ 0.29
SMG6-207ENST00000570756 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 PGRMC1O00264 195 aaKnown RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 PAX7P23759 505 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 USP11P51784 963 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 EIF3BP55884 814 aaKnown RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 NAA25Q14CX7 972 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 KRT71Q3SY84 523 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 C10orf76Q5T2E6 689 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 LRRC55Q6ZSA7 311 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 CCHCR1Q8TD31 782 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 BATF3Q9NR55 127 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 STK17AQ9UEE5 414 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms