RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 KLRC3Q07444 240 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 SPP2Q13103 211 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 KIAA1755Q5JYT7 1200 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 NOL9Q5SY16 702 aaKnown RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 FAM83BQ5T0W9 1011 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 TMTC3Q6ZXV5 915 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 ANKRD13AQ8IZ07 590 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 SRBD1Q8N5C6 995 aaKnown RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 C2orf69Q8N8R5 385 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 FAM184AQ8NB25 1140 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 MDFIQ99750 246 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 HINFPQ9BQA5 517 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 VAT1LQ9HCJ6 419 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 RBM28Q9NW13 759 aaKnown RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 ORC3Q9UBD5 711 aaPredicted RBP8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 MAD2L2Q9UI95 211 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 SCN4AP35499 1836 aa8.03□□□□□ -1.12
THUMPD1-205ENST00000570231 NID2Q14112 1375 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 CDKL5O76039 1030 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 RCAN1P53805 252 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 HMGCS2P54868 508 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 SNAP25P60880 206 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 AKAP17AQ02040 695 aaKnown RBP8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 GUCY1B3Q02153 619 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 SSRP1Q08945 709 aaKnown RBP8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 ZNF543Q08ER8 600 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 ASPRV1Q53RT3 343 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 HOMER1Q86YM7 354 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 ZNF280CQ8ND82 737 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 SMC1BQ8NDV3 1235 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 GMCL1P1Q8NEA9 526 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 DCAF4Q8WV16 495 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 BHMTQ93088 406 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 INTS4Q96HW7 963 aaKnown RBP8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 VCPKMTQ9H867 229 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 GINM1Q9NU53 330 aa8.02□□□□□ -1.13
THUMPD1-205ENST00000570231 VPS37CA5D8V6 355 aaPredicted RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 TMEM232C9JQI7 657 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 SNHG28P0DPA3 235 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 BMP3P12645 472 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 EPB42P16452 691 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 IFNAR1P17181 557 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 VCAM1P19320 739 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 GNAQP50148 359 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 HMGN5P82970 282 aaKnown RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 NTRK3Q16288 839 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 SLC35G1Q2M3R5 365 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 CST9Q5W186 159 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 GADL1Q6ZQY3 521 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 RAB44Q7Z6P3 723 aaPredicted RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 SMARCC2Q8TAQ2 1214 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 MKL1Q969V6 931 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 OPTNQ96CV9 577 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 PNMA5Q96PV4 448 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 LLPHQ9BRT6 129 aaKnown RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 ALG1Q9BT22 464 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 TANGO6Q9C0B7 1094 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 UBE2OQ9C0C9 1292 aaKnown RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 KIAA1683Q9H0B3 1180 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 RPAP3Q9H6T3 665 aaPredicted RBP8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 GJB4Q9NTQ9 266 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 TMOD4Q9NZQ9 345 aa8.01□□□□□ -1.13
THUMPD1-205ENST00000570231 CYTH3O43739 400 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 LILRB5O75023 590 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 DKK1O94907 266 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 ALBP02768 609 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 FDPSP14324 419 aaKnown RBP8□□□□□ -1.13
THUMPD1-205ENST00000570231 TAL1P17542 331 aaPredicted RBP8□□□□□ -1.13
THUMPD1-205ENST00000570231 USP14P54578 494 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 BACE1P56817 501 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 HUNKP57058 714 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 GRM1Q13255 1194 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 PKP1Q13835 747 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 DOC2BQ14184 412 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 PPP2R5BQ15173 497 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 MAP3K11Q16584 847 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 GPATCH4Q5T3I0 446 aaKnown RBP8□□□□□ -1.13
THUMPD1-205ENST00000570231 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 SYDE2Q5VT97 1194 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 IER5Q5VY09 327 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 LARP1BQ659C4 914 aaKnown RBP8□□□□□ -1.13
THUMPD1-205ENST00000570231 OTUD7BQ6GQQ9 843 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 HEATR3Q7Z4Q2 680 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 ERO1BQ86YB8 467 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 ADGRF4Q8IZF3 695 aa8□□□□□ -1.13
THUMPD1-205ENST00000570231 RRP36Q96EU6 259 aaKnown RBP8□□□□□ -1.13
THUMPD1-205ENST00000570231 PIGSQ96S52 555 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms