RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 A0A1W2PQ64 194 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 A0A1W2PQD8 194 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 ATP2A1O14983 1001 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 SLC37A4O43826 429 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 NEMFO60524 1076 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 CUTAO60888 179 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 HSD17B4P51659 736 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 HERVK_113P62684 666 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 PLS1Q14651 629 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 CCL15Q16663 113 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 LBX2Q6XYB7 198 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 RASAL3Q86YV0 1011 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 C4orf32Q8N8J7 132 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 TEX13BQ9BXU2 312 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 COL20A1Q9P218 1284 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
GDE1-205ENST00000569899 ZNFX1Q9P2E3 1918 aaKnown RBP11.33□□□□□ -0.6
GDE1-205ENST00000569899 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 CNMDO75829 334 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 FOSP01100 380 aaPredicted RBP11.33□□□□□ -0.6
GDE1-205ENST00000569899 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
GDE1-205ENST00000569899 PFKFB1P16118 471 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 SREBF1P36956 1147 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 GTF2A2P52657 109 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 CCDC73Q6ZRK6 1079 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 SMC1BQ8NDV3 1235 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 CRYGNQ8WXF5 182 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 PAGR1Q9BTK6 254 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 PNMA2Q9UL42 364 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 PLXNA1Q9UIW2 1896 aa11.33□□□□□ -0.6
GDE1-205ENST00000569899 VWA3AA6NCI4 1184 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 CETPP11597 493 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 VARSP26640 1264 aaKnown RBP11.32□□□□□ -0.6
GDE1-205ENST00000569899 STAT3P40763 770 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 NDUFA8P51970 172 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 UBXN2AP68543 259 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 GHRHRQ02643 423 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
GDE1-205ENST00000569899 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
GDE1-205ENST00000569899 IL17AQ16552 155 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 MCTP2Q6DN12 878 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 NSMFQ6X4W1 530 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 TEX2Q8IWB9 1127 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 DOCK5Q9H7D0 1870 aa11.32□□□□□ -0.6
GDE1-205ENST00000569899 CYP2C8P10632 490 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 CMA1P23946 247 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 FAM160A1Q05DH4 1040 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 ZSCAN23Q3MJ62 389 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 FMR1NBQ8N0W7 255 aaPredicted RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 ENGASEQ8NFI3 743 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 DDX25Q9UHL0 483 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 RPTORQ8N122 1335 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 PDHXO00330 501 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 LAD1O00515 517 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 RGS20O76081 388 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 SNW1Q13573 536 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 CALCRLQ16602 461 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 ARL6IP4Q66PJ3 421 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 RIOX2Q8IUF8 465 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 SYAP1Q96A49 352 aaPredicted RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 MRGPRX2Q96LB1 330 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 PURBQ96QR8 312 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
GDE1-205ENST00000569899 PKD2L1Q9P0L9 805 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms