RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 TMC5Q6UXY8 1006 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 PPIL6Q8IXY8 311 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 ANAPC16Q96DE5 110 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 CCDC140Q96MF4 163 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 HSPBP1Q9NZL4 362 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 MYOTQ9UBF9 498 aa7.68□□□□□ -1.18
CHD9-220ENST00000569794 MUSKO15146 869 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 ZNF623O75123 536 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 DGKIO75912 1065 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 SPDYAQ5MJ70 313 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 DENND5AQ6IQ26 1287 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 Q8TCH9 128 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 PHOSPHO1Q8TCT1 267 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 CHAMP1Q96JM3 812 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 EPB41L1Q9H4G0 881 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 CLDND1Q9NY35 253 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 ADAM29Q9UKF5 820 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 ZDHHC9Q9Y397 364 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 TESMINQ9Y4I5 508 aa7.67□□□□□ -1.18
CHD9-220ENST00000569794 HDLBPQ00341 1268 aaKnown RBP7.66□□□□□ -1.18
CHD9-220ENST00000569794 C6orf15Q6UXA7 325 aaPredicted RBP7.66□□□□□ -1.18
CHD9-220ENST00000569794 RBPJLQ9UBG7 517 aa7.66□□□□□ -1.18
CHD9-220ENST00000569794 GFRA1P56159 465 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 SV2CQ496J9 727 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 SMOC1Q9H4F8 434 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 LRP2BPQ9P2M1 347 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 CCDC9Q9Y3X0 531 aaKnown RBP7.65□□□□□ -1.18
CHD9-220ENST00000569794 HS3ST3A1Q9Y663 406 aa7.65□□□□□ -1.18
CHD9-220ENST00000569794 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 KLHL18O94889 574 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 KCNJ6P48051 423 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 KLF10Q13118 480 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 PROSER1Q86XN7 944 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 TMEM145Q8NBT3 493 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 ASH2LQ9UBL3 628 aa7.64□□□□□ -1.19
CHD9-220ENST00000569794 CNOT4O95628 575 aaKnown RBP7.63□□□□□ -1.19
CHD9-220ENST00000569794 CRB2Q5IJ48 1285 aa7.63□□□□□ -1.19
CHD9-220ENST00000569794 TMCO4Q5TGY1 634 aa7.63□□□□□ -1.19
CHD9-220ENST00000569794 FAM178BQ8IXR5 827 aa7.63□□□□□ -1.19
CHD9-220ENST00000569794 NPFFR2Q9Y5X5 522 aa7.63□□□□□ -1.19
CHD9-220ENST00000569794 SUSD5O60279 629 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 MAFKO60675 156 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 CYP4F22Q6NT55 531 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 Q6ZUG5 572 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 RALYLQ86SE5 291 aaKnown RBP7.62□□□□□ -1.19
CHD9-220ENST00000569794 DTX3Q8N9I9 347 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 TTLL11Q8NHH1 800 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 SEC61A2Q9H9S3 476 aa7.62□□□□□ -1.19
CHD9-220ENST00000569794 ING1Q9UK53 422 aaPredicted RBP7.62□□□□□ -1.19
CHD9-220ENST00000569794 B2RBV5 119 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 SLC35F1Q5T1Q4 408 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 PHF19Q5T6S3 580 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 VASNQ6EMK4 673 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 TRIM48Q8IWZ4 208 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 DLL4Q9NR61 685 aa7.61□□□□□ -1.19
CHD9-220ENST00000569794 KRIT1O00522 736 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
CHD9-220ENST00000569794 CAPNS1P04632 268 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 CHGBP05060 677 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 SMAD2Q15796 467 aaKnown RBP7.6□□□□□ -1.19
CHD9-220ENST00000569794 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
CHD9-220ENST00000569794 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 GNRHR2Q96P88 292 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 ACBD3Q9H3P7 528 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 SLC6A20Q9NP91 592 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 ACTR10Q9NZ32 417 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 INPP5FQ9Y2H2 1132 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 SLC4A7Q9Y6M7 1214 aa7.6□□□□□ -1.19
CHD9-220ENST00000569794 FOXS1O43638 330 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 KNG1P01042 644 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 HS1BP3Q53T59 392 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 TCTN3Q6NUS6 607 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 AJUBAQ96IF1 538 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 JAM3Q9BX67 310 aa7.59□□□□□ -1.19
CHD9-220ENST00000569794 SLC27A2O14975 620 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 CSF2RBP32927 897 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 GRIN1Q05586 938 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
CHD9-220ENST00000569794 LMF1Q96S06 567 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 ZNF341Q9BYN7 854 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
CHD9-220ENST00000569794 CKMP06732 381 aa7.57□□□□□ -1.2
CHD9-220ENST00000569794 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
CHD9-220ENST00000569794 PRKD1Q15139 912 aaPredicted RBP7.57□□□□□ -1.2
CHD9-220ENST00000569794 TNNI3KQ59H18 835 aa7.57□□□□□ -1.2
CHD9-220ENST00000569794 MRVI1Q9Y6F6 885 aa7.57□□□□□ -1.2
CHD9-220ENST00000569794 FBXO21O94952 628 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 GRIA2P42262 883 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 FOXE3Q13461 319 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 SKIDA1Q1XH10 827 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 GPR155Q7Z3F1 870 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 LRRC37BQ96QE4 947 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 GPR27Q9NS67 375 aa7.56□□□□□ -1.2
CHD9-220ENST00000569794 ZFP69BQ9UJL9 534 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms