RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 SMCR8Q8TEV9 937 aaPredicted RBP7.43□□□□□ -1.22
LINC00556-201ENST00000569603 TGFBRAP1Q8WUH2 860 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 C12orf42Q96LP6 360 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 NSUN5Q96P11 429 aaKnown RBP7.43□□□□□ -1.22
LINC00556-201ENST00000569603 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 EHD4Q9H223 541 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 ANTXR1Q9H6X2 564 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 RBPJLQ9UBG7 517 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 ZBTB21Q9ULJ3 1066 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 KCNMB2Q9Y691 235 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 ZBED9Q6R2W3 1325 aa7.43□□□□□ -1.22
LINC00556-201ENST00000569603 MYH7P12883 1935 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 MMP20O60882 483 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 CNMDO75829 334 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
LINC00556-201ENST00000569603 BAG3O95817 575 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 CAPN2P17655 700 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 GUCY1A2P33402 732 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 SHMT1P34896 483 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 UBXN2AP68543 259 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 GABPAQ06546 454 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 CCDC158Q5M9N0 1113 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 TTC39AQ5SRH9 613 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 GDF6Q6KF10 455 aaPredicted RBP7.42□□□□□ -1.22
LINC00556-201ENST00000569603 PANK1Q8TE04 598 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 TRIB2Q92519 343 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 P2RX7Q99572 595 aaKnown RBP7.42□□□□□ -1.22
LINC00556-201ENST00000569603 CCDC8Q9H0W5 538 aaPredicted RBP7.42□□□□□ -1.22
LINC00556-201ENST00000569603 AKTIPQ9H8T0 292 aa7.42□□□□□ -1.22
LINC00556-201ENST00000569603 BAZ2AQ9UIF9 1905 aaKnown RBP7.42□□□□□ -1.22
LINC00556-201ENST00000569603 ZNF236Q9UL36 1845 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 GREB1LQ9C091 1923 aaPredicted RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 C19orf81C9J6K1 198 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 F8W735 103 aaPredicted RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 RAB11FIP3O75154 756 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 HMGCRP04035 888 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 CYP7A1P22680 504 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 HERVK_113P62684 666 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 COX20Q5RI15 118 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 CCDC181Q5TID7 509 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 LBX2Q6XYB7 198 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 ITPRIPQ8IWB1 547 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 FTSJ3Q8IY81 847 aaKnown RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 DIS3LQ8TF46 1054 aaKnown RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 DEFB118Q96PH6 123 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 PORCNQ9H237 461 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 AS3MTQ9HBK9 375 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 ZBTB40Q9NUA8 1239 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 SAP30BPQ9UHR5 308 aaKnown RBP7.41□□□□□ -1.22
LINC00556-201ENST00000569603 EXOC6BQ9Y2D4 811 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 TRANK1O15050 2925 aa7.41□□□□□ -1.22
LINC00556-201ENST00000569603 MYH8P13535 1937 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 REV3LO60673 3130 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 GH2P01242 217 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 PSAPP07602 524 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 COL6A1P12109 1028 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 PLCD1P51178 756 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 ERVK-24P63145 666 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 PABPC4Q13310 644 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00556-201ENST00000569603 SETDB1Q15047 1291 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 TRIP4Q15650 581 aaPredicted RBP7.4□□□□□ -1.22
LINC00556-201ENST00000569603 FAM26DQ5JW98 314 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 NME8Q8N427 588 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 IL22RA1Q8N6P7 574 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 MAGEB6Q8N7X4 407 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 MIGA1Q8NAN2 632 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00556-201ENST00000569603 COA7Q96BR5 231 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 KIAA1683Q9H0B3 1180 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 SERPINB13Q9UIV8 391 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 OGDHLQ9ULD0 1010 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 TRIM33Q9UPN9 1127 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
LINC00556-201ENST00000569603 BDP1A6H8Y1 2624 aa7.4□□□□□ -1.23
LINC00556-201ENST00000569603 SMCHD1A6NHR9 2005 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
LINC00556-201ENST00000569603 PFASO15067 1338 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 RPTORQ8N122 1335 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 A0A1W2PRG0 241 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 IDH1O75874 414 aaKnown RBP7.39□□□□□ -1.23
LINC00556-201ENST00000569603 HOXD8P13378 290 aaPredicted RBP7.39□□□□□ -1.23
LINC00556-201ENST00000569603 PDE6AP16499 860 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 VCAM1P19320 739 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 FSTP19883 344 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 SOX18P35713 384 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 CATSPERGQ6ZRH7 1159 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 Q6ZS46 218 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 AACSQ86V21 672 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 ERC1Q8IUD2 1116 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 ETFBKMTQ8IXQ9 262 aa7.39□□□□□ -1.23
LINC00556-201ENST00000569603 AGGF1Q8N302 714 aaeCLIP7.39□□□□□ -1.23
LINC00556-201ENST00000569603 GPRC5AQ8NFJ5 357 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms