RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 PRMT3O60678 531 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 KRT76Q01546 638 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 TTLL4Q14679 1199 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 CCDC144BQ3MJ40 725 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 LEXMQ3ZCV2 418 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 RNFT1Q5M7Z0 435 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 CCDC158Q5M9N0 1113 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 TMED8Q6PL24 325 aaPredicted RBP7.11□□□□□ -1.27
CDH13-212ENST00000569144 SPICE1Q8N0Z3 855 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 MAGEB6Q8N7X4 407 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 MIGA1Q8NAN2 632 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 REPS2Q8NFH8 660 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 SCLYQ96I15 445 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 ZNF512BQ96KM6 892 aaPredicted RBP7.11□□□□□ -1.27
CDH13-212ENST00000569144 PRIMPOLQ96LW4 560 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 TRERF1Q96PN7 1200 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 MEIS3Q99687 375 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
CDH13-212ENST00000569144 UBE2ZQ9H832 354 aaPredicted RBP7.11□□□□□ -1.27
CDH13-212ENST00000569144 PIH1D3Q9NQM4 214 aaKnown RBP7.11□□□□□ -1.27
CDH13-212ENST00000569144 GRIN2DO15399 1336 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 KIF28PB7ZC32 967 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
CDH13-212ENST00000569144 ACTN1P12814 892 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 IL9P15248 144 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 ZAP70P43403 619 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 ICA1Q05084 483 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 UBAP2LQ14157 1087 aaKnown RBP7.1□□□□□ -1.27
CDH13-212ENST00000569144 GAS6Q14393 721 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 ALDH1L2Q3SY69 923 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 SIAH1Q8IUQ4 282 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 HERC6Q8IVU3 1022 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.1□□□□□ -1.27
CDH13-212ENST00000569144 DDX11Q96FC9 970 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 TEX13BQ9BXU2 312 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 TRPV6Q9H1D0 765 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 GPR108Q9NPR9 543 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 FBXO28Q9NVF7 368 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 PPP1R9AQ9ULJ8 1098 aa7.1□□□□□ -1.27
CDH13-212ENST00000569144 PRRC2BQ5JSZ5 2229 aaKnown RBP7.1□□□□□ -1.27
CDH13-212ENST00000569144 MYH1P12882 1939 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 MYO9BQ13459 2157 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 ASTN1O14525 1302 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 ZNF536O15090 1300 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 ZEB2O60315 1214 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 IDH1O75874 414 aaKnown RBP7.09□□□□□ -1.27
CDH13-212ENST00000569144 RFC2P35250 354 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 BEX3Q00994 111 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 G3BP1Q13283 466 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDH13-212ENST00000569144 SNRNP48Q6IEG0 339 aaKnown RBP7.09□□□□□ -1.27
CDH13-212ENST00000569144 ARMCX2Q7L311 632 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 NLRP8Q86W28 1048 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 ALDH16A1Q8IZ83 802 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 FGD4Q96M96 766 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 MFSD14AQ96MC6 490 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 DBNDD2Q9BQY9 259 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 ZCCHC2Q9C0B9 1178 aaKnown RBP7.09□□□□□ -1.27
CDH13-212ENST00000569144 KATNBL1Q9H079 304 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
CDH13-212ENST00000569144 PARP14Q460N5 1801 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 ZNFX1Q9P2E3 1918 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 GNAI3P08754 354 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 SUPT20HL2P0C7V6 817 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 KCNA5P22460 613 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 TNFAIP2Q03169 654 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 FSCN1Q16658 493 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 LRRC69Q6ZNQ3 347 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 HFE2Q6ZVN8 426 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 DEFB128Q7Z7B8 93 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 TLK2Q86UE8 772 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 CLEC10AQ8IUN9 316 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 CCDC144CPQ8IYA2 1237 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 GDPD5Q8WTR4 605 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 CLP1Q92989 425 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 ABHD17AQ96GS6 310 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 RIOK1Q9BRS2 568 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 API5Q9BZZ5 524 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 MCM9Q9NXL9 1143 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 RIPK3Q9Y572 518 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 FPGT-TNNI3KV9GXZ4 949 aa7.08□□□□□ -1.28
CDH13-212ENST00000569144 COL4A4P53420 1690 aaPredicted RBP7.08□□□□□ -1.28
CDH13-212ENST00000569144 WDFY4Q6ZS81 3184 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 ATP2A1O14983 1001 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 ATXN7O15265 892 aaPredicted RBP7.07□□□□□ -1.28
CDH13-212ENST00000569144 BNIP3LO60238 219 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms