RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 DOCK5Q9H7D0 1870 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 HAX1O00165 279 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 MEIS1O00470 390 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 LAD1O00515 517 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 RGS20O76081 388 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 CYP2B6P20813 491 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 HOXD10P28358 340 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 MCM7P33993 719 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 ZNF76P36508 570 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 PRMT2P55345 433 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 ATP2C1P98194 919 aaPredicted RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 PTPAQ15257 358 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 FOXD4L6Q3SYB3 417 aaPredicted RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 GNPTABQ3T906 1256 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 PRR16Q569H4 304 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 FOXD4L3Q6VB84 417 aaPredicted RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 GPRASP2Q96D09 838 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 CHAMP1Q96JM3 812 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 VTA1Q9NP79 307 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 KCNMB3Q9NPA1 279 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 CLIC4Q9Y696 253 aa11.83□□□□□ -0.52
CDH3-210ENST00000569117 DDX49Q9Y6V7 483 aaKnown RBP11.83□□□□□ -0.52
CDH3-210ENST00000569117 TBX3O15119 743 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 FOXN1O15353 648 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 FIBPO43427 364 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
CDH3-210ENST00000569117 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
CDH3-210ENST00000569117 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
CDH3-210ENST00000569117 MTMR1Q13613 665 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 ZNF174Q15697 407 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 CCL14Q16627 93 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 OTOP1Q7RTM1 612 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 NLRX1Q86UT6 975 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 LINC00301Q8NCQ3 95 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 CYP2W1Q8TAV3 490 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 ETNPPLQ8TBG4 499 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 SCAND2PQ9GZW5 306 aaPredicted RBP11.82□□□□□ -0.52
CDH3-210ENST00000569117 KATNBL1Q9H079 304 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.82□□□□□ -0.52
CDH3-210ENST00000569117 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 ELP1O95163 1332 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 HTTP42858 3142 aa11.82□□□□□ -0.52
CDH3-210ENST00000569117 FRMPD3Q5JV73 1810 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 BAG4O95429 457 aaKnown RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 SNAI1O95863 264 aaPredicted RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 OR52Z1P0C646 297 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 ICAM3P32942 547 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 PRPHP41219 470 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 STK38Q15208 465 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 CALCRLQ16602 461 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 PPP2R2DQ66LE6 453 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 FBXO16Q8IX29 292 aaPredicted RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 C4orf32Q8N8J7 132 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 TRIB2Q92519 343 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 WDR11Q9BZH6 1224 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 TMEM60Q9H2L4 133 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 ABHD16BQ9H3Z7 469 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
CDH3-210ENST00000569117 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
CDH3-210ENST00000569117 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
CDH3-210ENST00000569117 SPATA31C2B4DYI2 1134 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 MSH4O15457 936 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 MAFGO15525 162 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 PPP6R2O75170 966 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 ARP10275 920 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
CDH3-210ENST00000569117 CEBPZQ03701 1054 aaKnown RBP11.8□□□□□ -0.52
CDH3-210ENST00000569117 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 SLFN12Q8IYM2 578 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 TMEM87AQ8NBN3 555 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 SCFD2Q8WU76 684 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 HAS1Q92839 578 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
CDH3-210ENST00000569117 LIMD1Q9UGP4 676 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 RCOR1Q9UKL0 485 aa11.8□□□□□ -0.52
CDH3-210ENST00000569117 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms