RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 SMOC1Q9H4F8 434 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
CYLD-213ENST00000568744 COL4A3BPQ9Y5P4 624 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
CYLD-213ENST00000568744 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 SLC12A8A0AV02 714 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 PTPDC1A2A3K4 754 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 LRRC10BA6NIK2 292 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 ZNF891A8MT65 544 aaPredicted RBP8.08□□□□□ -1.12
CYLD-213ENST00000568744 ZNF561-AS1K7EIQ3 104 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 CBX4O00257 560 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 SCNN1BP51168 640 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 NFKB2Q00653 900 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 GRIN1Q05586 938 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 STRN3Q13033 797 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 TUSC3Q13454 348 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 SEPT7Q16181 437 aaKnown RBP8.08□□□□□ -1.12
CYLD-213ENST00000568744 OR2W6PQ8NHA6 318 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 UHMK1Q8TAS1 419 aaKnown RBP8.08□□□□□ -1.12
CYLD-213ENST00000568744 EPB41L4BQ9H329 900 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 KCNK12Q9HB15 430 aa8.08□□□□□ -1.12
CYLD-213ENST00000568744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 TRAF5O00463 557 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 MAN2B1O00754 1011 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 TADA3O75528 432 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 LTFP02788 710 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 AMY2AP04746 511 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 VIL1P09327 827 aaKnown RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 AMY2BP19961 511 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 VIPR1P32241 457 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 LACTBP83111 547 aaPredicted RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 SRSF3P84103 164 aaKnown RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 SLC9A5Q14940 896 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 HABP4Q5JVS0 413 aaKnown RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 NLGN4XQ8N0W4 816 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 USP7Q93009 1102 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 ZNF552Q9H707 407 aaPredicted RBP8.07□□□□□ -1.12
CYLD-213ENST00000568744 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 SIRT5Q9NXA8 310 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 FAM53CQ9NYF3 392 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 ASH2LQ9UBL3 628 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 SRPK3Q9UPE1 567 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 ZNF652Q9Y2D9 606 aa8.07□□□□□ -1.12
CYLD-213ENST00000568744 TCRBV5S2A0A599 114 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 SCDO00767 359 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 HIP1RO75146 1068 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 IL2P60568 153 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 ARHGAP44Q17R89 818 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 CPZQ66K79 652 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 CYP4F22Q6NT55 531 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 KCTD1Q719H9 257 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.06□□□□□ -1.12
CYLD-213ENST00000568744 ANKLE2Q86XL3 938 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 TRIM48Q8IWZ4 208 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 ARRDC4Q8NCT1 418 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 PHOSPHO1Q8TCT1 267 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 SH3RF2Q8TEC5 729 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 TSPAN17Q96FV3 270 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 GPATCH3Q96I76 525 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 GPR101Q96P66 508 aaPredicted RBP8.06□□□□□ -1.12
CYLD-213ENST00000568744 RIC8BQ9NVN3 520 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 THG1LQ9NWX6 298 aaKnown RBP8.06□□□□□ -1.12
CYLD-213ENST00000568744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.06□□□□□ -1.12
CYLD-213ENST00000568744 B4GALT6Q9UBX8 382 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 ATP23Q9Y6H3 246 aa8.06□□□□□ -1.12
CYLD-213ENST00000568744 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 YBX1P67809 324 aaKnown RBP8.05□□□□□ -1.12
CYLD-213ENST00000568744 IRF9Q00978 393 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 BTBD8Q5XKL5 378 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 STRA8Q7Z7C7 330 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 DDX11Q96FC9 970 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 BOCQ9BWV1 1114 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 PCDH12Q9NPG4 1184 aa8.05□□□□□ -1.12
CYLD-213ENST00000568744 H7C1D1 291 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 CPEP16870 476 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
CYLD-213ENST00000568744 NCKAP1LP55160 1127 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 FIGNQ5HY92 759 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 FAM126AQ9BYI3 521 aaPredicted RBP8.04□□□□□ -1.12
CYLD-213ENST00000568744 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 TELO2Q9Y4R8 837 aa8.04□□□□□ -1.12
CYLD-213ENST00000568744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
CYLD-213ENST00000568744 F2P00734 622 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 PMLP29590 882 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 STAT5AP42229 794 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 ANAPC15P60006 121 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 TMEM132BQ14DG7 1078 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 FSTL4Q6MZW2 842 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 HHIPL2Q6UWX4 724 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 KIF18BQ86Y91 864 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 PCIF1Q9H4Z3 704 aa8.03□□□□□ -1.12
CYLD-213ENST00000568744 PRAMEF25A6NGN4 478 aa8.02□□□□□ -1.13
CYLD-213ENST00000568744 ATP2A2P16615 1042 aaKnown RBP8.02□□□□□ -1.13
CYLD-213ENST00000568744 PTPN1P18031 435 aaKnown RBP8.02□□□□□ -1.13
CYLD-213ENST00000568744 KPNA1P52294 538 aaPredicted RBP8.02□□□□□ -1.13
CYLD-213ENST00000568744 IGBP1P78318 339 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms