RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 M0R2C6 588 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 CSPG5O95196 566 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 TSPY3P0CV98 308 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 TSPY8P0CW00 308 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 ARP10275 920 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 CTNNB1P35222 781 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 BMPR1AP36894 532 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 ID4P47928 161 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 MFSD10Q14728 455 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 KIAA0753Q2KHM9 967 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 RNF207Q6ZRF8 634 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-207ENST00000568691 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 GH1P01241 217 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 HOXD8P13378 290 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 HOXC8P31273 242 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 COASYQ13057 564 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 DNERQ8NFT8 737 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 COL20A1Q9P218 1284 aa13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-207ENST00000568691 EMSYQ7Z589 1322 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 FOXP2O15409 715 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 GPAA1O43292 621 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 MMP1P03956 469 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 RB1P06400 928 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 TMEM105Q8N8V8 129 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 PCDHGC5Q9Y5F6 944 aa13.9□□□□□ -0.18
VPS9D1-207ENST00000568691 SGSM2O43147 1006 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 ICAM3P32942 547 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 THPOP40225 353 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 TDO2P48775 406 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 DGKDQ16760 1214 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 FRMD5Q7Z6J6 570 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 SUSD6Q92537 303 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 IL17RAQ96F46 866 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 C11orf84Q9BUA3 381 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 BARX2Q9UMQ3 279 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 PLAGL2Q9UPG8 496 aa13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 TPRP12270 2363 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-207ENST00000568691 NDUFV1P49821 464 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 PTPN21Q16825 1174 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 ADSSL1Q8N142 457 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 EFHBQ8N7U6 833 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 KBTBD3Q8NAB2 608 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 SEPT8Q92599 483 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 APPBP2Q92624 585 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 RIPOR3Q96MK2 946 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 TAAR1Q96RJ0 339 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 PHF7Q9BWX1 381 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 FRMPD2Q68DX3 1309 aaPredicted RBP13.88□□□□□ -0.19
VPS9D1-207ENST00000568691 ITGB1P05556 798 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 ANAPC15P60006 121 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 PPARAQ07869 468 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 BECN1Q14457 450 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 SPPL3Q8TCT6 385 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 RMDN1Q96DB5 314 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 SEC62Q99442 399 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 C16orf70Q9BSU1 422 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 ZNF287Q9HBT7 754 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
VPS9D1-207ENST00000568691 CACNA1GO43497 2377 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 TREHO43280 583 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 KDM4AO75164 1064 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 CTSHP09668 335 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 NUBP1P53384 320 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms