RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 ZNF274Q96GC6 653 aaPredicted RBP9.65□□□□□ -0.86
TSC2-223ENST00000568566 TAAR1Q96RJ0 339 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 MAP3K14Q99558 947 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 SPZ1Q9BXG8 430 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 CD320Q9NPF0 282 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
TSC2-223ENST00000568566 TRIP12Q14669 1992 aaPredicted RBP9.64□□□□□ -0.87
TSC2-223ENST00000568566 PNMA6FA0A0J9YX94 578 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 GPR37L1O60883 481 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 KCNA4P22459 653 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 CALML3P27482 149 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 KIF5BP33176 963 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 WDR5P61964 334 aaKnown RBP9.64□□□□□ -0.87
TSC2-223ENST00000568566 BFSP2Q13515 415 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 PPP2R5BQ15173 497 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 UBE2SQ16763 222 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 BRDTQ58F21 947 aaPredicted RBP9.64□□□□□ -0.87
TSC2-223ENST00000568566 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 USP17L6PQ6QN14 398 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 COPS5Q92905 334 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 SLC26A6Q9BXS9 759 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 TMEM260Q9NX78 707 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 ADD3Q9UEY8 706 aaKnown RBP9.64□□□□□ -0.87
TSC2-223ENST00000568566 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
TSC2-223ENST00000568566 NID2Q14112 1375 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
TSC2-223ENST00000568566 STXBP3O00186 592 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 BAIAP3O94812 1187 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 CALM1P0DP23 149 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 CALM2P0DP24 149 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 CALM3P0DP25 149 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 DEFB103AP81534 67 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 PDE4DQ08499 809 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 RABEP1Q15276 862 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 HEATR3Q7Z4Q2 680 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 ALYREFQ86V81 257 aaKnown RBP9.63□□□□□ -0.87
TSC2-223ENST00000568566 SYTL5Q8TDW5 730 aaPredicted RBP9.63□□□□□ -0.87
TSC2-223ENST00000568566 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
TSC2-223ENST00000568566 PGBD1Q96JS3 809 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 AMNQ9BXJ7 453 aa9.63□□□□□ -0.87
TSC2-223ENST00000568566 SLKQ9H2G2 1235 aaPredicted RBP9.63□□□□□ -0.87
TSC2-223ENST00000568566 SIP14410 1827 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 A6NJR5 290 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 PI4K2BG5E9Z4 385 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 PRPF3O43395 683 aaKnown RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 EDIL3O43854 480 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 IFNAR1P17181 557 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 KCNA5P22460 613 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 GNAQP50148 359 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 RPS6P62753 249 aaKnown RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 PTGISQ16647 500 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 NSUN7Q8NE18 718 aaKnown RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 IL31RAQ8NI17 732 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 RASGRP4Q8TDF6 673 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 SCFD2Q8WU76 684 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 GTF3C6Q969F1 213 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 CTAGE1Q96RT6 745 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 LZTS2Q9BRK4 669 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
TSC2-223ENST00000568566 VPS54Q9P1Q0 977 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 LIMCH1Q9UPQ0 1083 aa9.62□□□□□ -0.87
TSC2-223ENST00000568566 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 MEIS2O14770 477 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
TSC2-223ENST00000568566 KPNA6O60684 536 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 ARIH2O95376 493 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 CFBP00751 764 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 TXNP10599 105 aaKnown RBP9.61□□□□□ -0.87
TSC2-223ENST00000568566 SELPP16109 830 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
TSC2-223ENST00000568566 GPNMBQ14956 572 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
TSC2-223ENST00000568566 FAM117BQ6P1L5 589 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 RNF207Q6ZRF8 634 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 LRRC8DQ7L1W4 858 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 GJD3Q8N144 294 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 CAGE1Q8TC20 777 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 AFAP1L1Q8TED9 768 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
TSC2-223ENST00000568566 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 BCAS3Q9H6U6 928 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
TSC2-223ENST00000568566 UPF2Q9HAU5 1272 aaKnown RBP9.61□□□□□ -0.87
TSC2-223ENST00000568566 ABCB11O95342 1321 aa9.6□□□□□ -0.87
TSC2-223ENST00000568566 LOC102724159A0A0B4J2E5 919 aa9.6□□□□□ -0.87
TSC2-223ENST00000568566 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
TSC2-223ENST00000568566 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
TSC2-223ENST00000568566 PRR33A8MZF0 331 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms