RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 CCDC155Q8N6L0 562 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 ENAHQ8N8S7 591 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SLC43A3Q8NBI5 491 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 NCOA7Q8NI08 942 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 C1orf216Q8TAB5 229 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 STK32AQ8WU08 396 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 NLRP7Q8WX94 980 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 MYLIPQ8WY64 445 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 HERVK_113Q902F9 699 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SYMPKQ92797 1274 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CLP1Q92989 425 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 GUCD1Q96NT3 240 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 KCNK17Q96T54 332 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 RMDN3Q96TC7 470 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 AMNQ9BXJ7 453 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 FTOQ9C0B1 505 aaKnown RBP eCLIP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 TRPV6Q9H1D0 765 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 ALDH8A1Q9H2A2 487 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CUEDC1Q9NWM3 386 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SLC4A7Q9Y6M7 1214 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 ASTN1O14525 1302 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 TNKSO95271 1327 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 LAMA3Q16787 3333 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 ZBTB5O15062 677 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 EIF3JO75822 258 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 PARNO95453 639 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 RFC2P35250 354 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 LAMC2Q13753 1193 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 WTAPQ15007 396 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 PTGISQ16647 500 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 DGKDQ16760 1214 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 QRICH1Q2TAL8 776 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 NBPF20Q3BBV1 942 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF662Q6ZS27 426 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 CHST3Q7LGC8 479 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 DEFB128Q7Z7B8 93 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 CATIPQ7Z7H3 387 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 TMTC2Q8N394 836 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 C7orf31Q8N865 590 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF454Q8N9F8 522 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 SYTL5Q8TDW5 730 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 CUL5Q93034 780 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 TAAR1Q96RJ0 339 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 NOC4LQ9BVI4 516 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 KATNAL1Q9BW62 490 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 TTYH1Q9H313 450 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 CPVLQ9H3G5 476 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 JMJD4Q9H9V9 463 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 PLA2G2EQ9NZK7 142 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 PCDHA1Q9Y5I3 950 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-213ENST00000568358 GBF1Q92538 1859 aa5.4□□□□□ -1.55
HERPUD1-213ENST00000568358 SCN10AQ9Y5Y9 1956 aa5.4□□□□□ -1.55
HERPUD1-213ENST00000568358 PNMA6FA0A0J9YX94 578 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 GCOM1H8Y6P7 765 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 NR3C2P08235 984 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 POLR2MP0CAP2 368 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 TGFB3P10600 412 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 CYP2C9P11712 490 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 MYCLP12524 364 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 ATP2A2P16615 1042 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 EIF2AK2P19525 551 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 IGFBP4P22692 258 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 EDNRBP24530 442 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 CHMLP26374 656 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 CCND2P30279 289 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 KIF5BP33176 963 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 KCNJ6P48051 423 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 MRPL58Q14197 206 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 LY6KQ17RY6 165 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 GNPTABQ3T906 1256 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 TMEM67Q5HYA8 995 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 TMEM63BQ5T3F8 832 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 NFXL1Q6ZNB6 911 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 C16orf59Q7L2K0 433 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 HOMER1Q86YM7 354 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 AFG1LQ8WV93 481 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 PPM1EQ8WY54 764 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 COPS5Q92905 334 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 SCLYQ96I15 445 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 SLC4A5Q9BY07 1137 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 PBX4Q9BYU1 374 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 PXMP2Q9NR77 195 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 SEC63Q9UGP8 760 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 PCDHA11Q9Y5I1 949 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 SCN5AQ14524 2016 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 COL6A3P12111 3177 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 GRIN2DO15399 1336 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 LRRC37A2A6NM11 1700 aa5.39□□□□□ -1.55
HERPUD1-213ENST00000568358 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 E7EWF7 191 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms