RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SMCO2A6NFE2 343 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 GRXCR1A8MXD5 290 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 H3BRB1 525 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 hCG_1984214I3L0E3 225 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 F2P00734 622 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 FOSP01100 380 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 RPS6KB1P23443 525 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 ADD1P35611 737 aaKnown RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 METAP2P50579 478 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 ADCY7P51828 1080 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 NAPAP54920 295 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 UBE2SQ16763 222 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 WWC2Q6AWC2 1192 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 METTL7BQ6UX53 244 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 DEFB128Q7Z7B8 93 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF713Q8N859 430 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CAGE1Q8TC20 777 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 BRF1Q92994 677 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 GPRASP2Q96D09 838 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 VWCEQ96DN2 955 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CDHR1Q96JP9 859 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 GUCD1Q96NT3 240 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CTAGE1Q96RT6 745 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CDX2Q99626 313 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 FTOQ9C0B1 505 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 GLT8D2Q9H1C3 349 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 TTYH1Q9H313 450 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 TUT1Q9H6E5 874 aaKnown RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 BARHL2Q9NY43 387 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CXXC1Q9P0U4 656 aaPredicted RBP7.93□□□□□ -1.14
SF3B3-209ENST00000567635 MSRAQ9UJ68 235 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 CNTNAP5Q8WYK1 1306 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 TANC1Q9C0D5 1861 aa7.93□□□□□ -1.14
SF3B3-209ENST00000567635 STXBP3O00186 592 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 MAFGO15525 162 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 PARNO95453 639 aaKnown RBP7.92□□□□□ -1.14
SF3B3-209ENST00000567635 LGALS2P05162 132 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 ACTN1P12814 892 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 SELPP16109 830 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 ITGB5P18084 799 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 DNAJB2P25686 324 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF200P98182 395 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-209ENST00000567635 PTK7Q13308 1070 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 PFKFB3Q16875 520 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-209ENST00000567635 PPP1R18Q6NYC8 613 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 RUFY3Q7L099 469 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 SLC17A8Q8NDX2 589 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 AFAP1L1Q8TED9 768 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 TIFAQ96CG3 184 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 GPR20Q99678 358 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 AGXT2Q9BYV1 514 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 JADE2Q9NQC1 790 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 UBIAD1Q9Y5Z9 338 aa7.92□□□□□ -1.14
SF3B3-209ENST00000567635 C17orf102A2RUQ5 167 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PRPF3O43395 683 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ATP9AO75110 1047 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SMIM10L2AP0DMW4 78 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SMIM10L2BP0DMW5 78 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 GNAT1P11488 350 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 CKBP12277 381 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SCG2P13521 617 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PDIA3P30101 505 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PBX2P40425 430 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 EVCP57679 992 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 AKAP17AQ02040 695 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SP4Q02446 784 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 RBL2Q08999 1139 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 MTMR1Q13613 665 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 RAB30Q15771 203 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 UTP14CQ5TAP6 766 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 MCTP2Q6DN12 878 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 TYW1BQ6NUM6 668 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 LRRC8DQ7L1W4 858 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SERINC5Q86VE9 423 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 SEPT1Q8WYJ6 367 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 DHX38Q92620 1227 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ATP6V0A1Q93050 837 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 MXRA8Q9BRK3 442 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PBX4Q9BYU1 374 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 TM6SF1Q9BZW5 370 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 RNPEPQ9H4A4 650 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF215Q9UL58 517 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 CYP46A1Q9Y6A2 500 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PTPRSQ13332 1948 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 MICAL3Q7RTP6 2002 aa7.91□□□□□ -1.14
SF3B3-209ENST00000567635 PRRC2BQ5JSZ5 2229 aaKnown RBP7.91□□□□□ -1.14
SF3B3-209ENST00000567635 GSTTP1A0A1W2PQM5 241 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 MEIS1O00470 390 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 KCNA2P16389 499 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 TCF7P36402 384 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF76P36508 570 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 CLK2P49760 499 aaKnown RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 RABGGTBP53611 331 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms