RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NR5A1Q13285 461 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 NEDD9Q14511 834 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 PPP4R3AQ6IN85 833 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 CCDC62Q6P9F0 684 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 PIK3AP1Q6ZUJ8 805 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 SPC25Q9HBM1 224 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
CLN6-208ENST00000567060 ADAMTS3O15072 1205 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 RGS20O76081 388 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 SYT1P21579 422 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 GUCY1B3Q02153 619 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 MTMR1Q13613 665 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 Q4G0T1 1027 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 SEPT14Q6ZU15 432 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 BRAPQ7Z569 592 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
CLN6-208ENST00000567060 MBOAT7Q96N66 472 aa18.97■□□□□ 0.63
CLN6-208ENST00000567060 NOL7Q9UMY1 257 aaKnown RBP18.97■□□□□ 0.63
CLN6-208ENST00000567060 GNEQ9Y223 722 aaKnown RBP18.97■□□□□ 0.63
CLN6-208ENST00000567060 STX6O43752 255 aa18.96■□□□□ 0.63
CLN6-208ENST00000567060 TXNP10599 105 aaKnown RBP18.96■□□□□ 0.63
CLN6-208ENST00000567060 ITGB5P18084 799 aa18.96■□□□□ 0.63
CLN6-208ENST00000567060 FOSBP53539 338 aa18.96■□□□□ 0.63
CLN6-208ENST00000567060 INF2Q27J81 1249 aa18.96■□□□□ 0.63
CLN6-208ENST00000567060 DDX41Q9UJV9 622 aaKnown RBP18.96■□□□□ 0.63
CLN6-208ENST00000567060 IGLV3-22A0A075B6J6 115 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 GH1P01241 217 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 FOSL2P15408 326 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 CST5P28325 142 aaPredicted RBP18.95■□□□□ 0.62
CLN6-208ENST00000567060 GJA9P57773 515 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 LAMC2Q13753 1193 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 BRDTQ58F21 947 aaPredicted RBP18.95■□□□□ 0.62
CLN6-208ENST00000567060 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 UPF3AQ9H1J1 476 aaKnown RBP18.95■□□□□ 0.62
CLN6-208ENST00000567060 ZSCAN16Q9H4T2 348 aaPredicted RBP18.95■□□□□ 0.62
CLN6-208ENST00000567060 PDGFCQ9NRA1 345 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 KCNH7Q9NS40 1196 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 RTEL1Q9NZ71 1219 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 DAXXQ9UER7 740 aaPredicted RBP18.95■□□□□ 0.62
CLN6-208ENST00000567060 PHF24Q9UPV7 400 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 NFASCO94856 1347 aa18.95■□□□□ 0.62
CLN6-208ENST00000567060 FAM86B1E9PN63 330 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 TBX3O15119 743 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 FAM86B2P0C5J1 330 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 SMPD1P17405 629 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 MCTP1Q6DN14 999 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 PLA2G4DQ86XP0 818 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 AP5M1Q9H0R1 490 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 XPNPEP3Q9NQH7 507 aa18.94■□□□□ 0.62
CLN6-208ENST00000567060 VPS37CA5D8V6 355 aaPredicted RBP18.93■□□□□ 0.62
CLN6-208ENST00000567060 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 ZEB2O60315 1214 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 CPT1AP50416 773 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 GRIN2CQ14957 1233 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 LETM2Q2VYF4 491 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 METTL7BQ6UX53 244 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 RNF180Q86T96 592 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 TLK2Q86UE8 772 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 TSEN34Q9BSV6 310 aaKnown RBP18.93■□□□□ 0.62
CLN6-208ENST00000567060 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
CLN6-208ENST00000567060 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
CLN6-208ENST00000567060 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 EDIL3O43854 480 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 KPNA6O60684 536 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 ARIH2O95376 493 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 PGK1P00558 417 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 CLTBP09497 229 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 UBA1P22314 1058 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 SEMA3FQ13275 785 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 PRR16Q569H4 304 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 EARS2Q5JPH6 523 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 USP38Q8NB14 1042 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 PCSK9Q8NBP7 692 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 LENG9Q96B70 501 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 FAM20AQ96MK3 541 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 RIT2Q99578 217 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 SDF4Q9BRK5 362 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 AGO4Q9HCK5 861 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 DDX25Q9UHL0 483 aaKnown RBP18.92■□□□□ 0.62
CLN6-208ENST00000567060 MTMR6Q9Y217 621 aa18.92■□□□□ 0.62
CLN6-208ENST00000567060 CHD9Q3L8U1 2897 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 TMEM265A0A087WTH1 108 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 CCNT1O60563 726 aaKnown RBP18.91■□□□□ 0.62
CLN6-208ENST00000567060 ADAMTS4O75173 837 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 KCNA2P16389 499 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 MYSM1Q5VVJ2 828 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 DHX37Q8IY37 1157 aaKnown RBP18.91■□□□□ 0.62
CLN6-208ENST00000567060 SLFN12Q8IYM2 578 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 OR6J1Q8NGC5 347 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 PPTC7Q8NI37 304 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 MLXIPQ9HAP2 919 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 TCEAL9Q9UHQ7 104 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 SYNRGQ9UMZ2 1314 aa18.91■□□□□ 0.62
CLN6-208ENST00000567060 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms