RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
COMMD4-215ENST00000566843 GOLGA6L10A6NI86 522 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 BTNL10A8MVZ5 291 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 KIF1CO43896 1103 aaKnown RBP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 NTSR2O95665 410 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 HSD17B3P37058 310 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 EHHADHQ08426 723 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 BIRC3Q13489 604 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 NONOQ15233 471 aaKnown RBP eCLIP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 PROM2Q8N271 834 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 TRAPPC3O43617 180 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 PAEPP09466 180 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 MYZAPP0CAP1 466 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 NEDD9Q14511 834 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 SLC18A3Q16572 532 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 AGBL2Q5U5Z8 902 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 CCDC121Q6ZUS5 278 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 GPIHBP1Q8IV16 184 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 MAGEC3Q8TD91 643 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
COMMD4-215ENST00000566843 DDX20Q9UHI6 824 aaKnown RBP17.24■□□□□ 0.35
COMMD4-215ENST00000566843 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-215ENST00000566843 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
COMMD4-215ENST00000566843 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
COMMD4-215ENST00000566843 TECP42680 631 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 TFAP4Q01664 338 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 MECOMQ03112 1051 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 PSMD2Q13200 908 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 FAM83BQ5T0W9 1011 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 LRRC45Q96CN5 670 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 GOLGA6L7A0A1B0GV03 622 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 LACTB2Q53H82 288 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-215ENST00000566843 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 TSG101Q99816 390 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 LZTS2Q9BRK4 669 aa17.23■□□□□ 0.35
COMMD4-215ENST00000566843 PPANQ9NQ55 473 aaKnown RBP17.23■□□□□ 0.35
COMMD4-215ENST00000566843 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 EP400Q96L91 3159 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 TMCO5BA8MYB1 307 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 KCNQ4P56696 695 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 SIK1P57059 783 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 ZNF844Q08AG5 666 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-215ENST00000566843 RUFY4Q6ZNE9 571 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 PBKQ96KB5 322 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 OSBPL7Q9BZF2 842 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 NLRC4Q9NPP4 1024 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-215ENST00000566843 HPDP32754 393 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-215ENST00000566843 ZCWPW2Q504Y3 356 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 ANKRD20A8PQ5CZ79 823 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 CCDC114Q96M63 670 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 AIPL1Q9NZN9 384 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
COMMD4-215ENST00000566843 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 ZPR1O75312 459 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 BYSLQ13895 437 aaKnown RBP17.21■□□□□ 0.35
COMMD4-215ENST00000566843 ARMC9Q7Z3E5 817 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 KLHL7Q8IXQ5 586 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 ACTRT1Q8TDG2 376 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
COMMD4-215ENST00000566843 TAF4BQ92750 862 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
COMMD4-215ENST00000566843 MTMR9Q96QG7 549 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 PACSIN2Q9UNF0 486 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-215ENST00000566843 COL4A3BPQ9Y5P4 624 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
COMMD4-215ENST00000566843 DNM1LO00429 736 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 CAMTA2O94983 1202 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 ZBTB48P10074 688 aaPredicted RBP17.21■□□□□ 0.34
COMMD4-215ENST00000566843 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.34
COMMD4-215ENST00000566843 PARP9Q8IXQ6 854 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 GIMAP7Q8NHV1 300 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 P3H4Q92791 437 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 LSM14BQ9BX40 385 aaKnown RBP17.21■□□□□ 0.34
COMMD4-215ENST00000566843 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.34
COMMD4-215ENST00000566843 A0A087X0T9 212 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 FAM228BP0C875 321 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 DNA2P51530 1060 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 USP11P51784 963 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 CDR1P51861 262 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 PPP2R2AP63151 447 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 ITPK1Q13572 414 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 MTMR3Q13615 1198 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 HLTFQ14527 1009 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms