RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 HOXC8P31273 242 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 WDR5P61964 334 aaKnown RBP17.49■□□□□ 0.39
SMPD3-208ENST00000566723 HIC1Q14526 733 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 CYFIP1Q7L576 1253 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 MICU3Q86XE3 530 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
SMPD3-208ENST00000566723 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 PRDM6Q9NQX0 595 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 RTEL1Q9NZ71 1219 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 NCOR1O75376 2440 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 SIP14410 1827 aa17.49■□□□□ 0.39
SMPD3-208ENST00000566723 C17orf102A2RUQ5 167 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 GPR20Q99678 358 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 SENP7Q9BQF6 1050 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 PSTPIP2Q9H939 334 aa17.48■□□□□ 0.39
SMPD3-208ENST00000566723 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 ABHD14A-ACY1A0A1B0GW23 586 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 TLL1O43897 1013 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 SMIM10L2AP0DMW4 78 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 SMIM10L2BP0DMW5 78 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 TAP1Q03518 808 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 TJAP1Q5JTD0 557 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 NLRX1Q86UT6 975 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 SYMPKQ92797 1274 aaKnown RBP17.47■□□□□ 0.39
SMPD3-208ENST00000566723 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 GPRASP2Q96D09 838 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 THEGQ9P2T0 379 aa17.47■□□□□ 0.39
SMPD3-208ENST00000566723 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
SMPD3-208ENST00000566723 EFCAB14O75071 495 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 ARHGEF15O94989 841 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 DEFB103AP81534 67 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-208ENST00000566723 TCTN1Q2MV58 587 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 TRIM50Q86XT4 487 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 NEK1Q96PY6 1258 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 XIRP2A4UGR9 3374 aa17.46■□□□□ 0.39
SMPD3-208ENST00000566723 CNTNAP5Q8WYK1 1306 aa17.46■□□□□ 0.38
SMPD3-208ENST00000566723 EPOPA6NHQ4 379 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 CDC45O75419 566 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 LGR5O75473 907 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 THPOP40225 353 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 SP4Q02446 784 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 IKBKEQ14164 716 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 UBE2SQ16763 222 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 GIMAP8Q8ND71 665 aaPredicted RBP17.45■□□□□ 0.38
SMPD3-208ENST00000566723 ATXN2LQ8WWM7 1075 aaKnown RBP17.45■□□□□ 0.38
SMPD3-208ENST00000566723 CDHR1Q96JP9 859 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 CERS4Q9HA82 394 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 RBM28Q9NW13 759 aaKnown RBP17.45■□□□□ 0.38
SMPD3-208ENST00000566723 TELO2Q9Y4R8 837 aa17.45■□□□□ 0.38
SMPD3-208ENST00000566723 SPDYE3A6NKU9 549 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 RSPH10B2B2RC85 870 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 TREHO43280 583 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 CAND2O75155 1236 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 RSPH10BP0C881 870 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 KCNA2P16389 499 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
SMPD3-208ENST00000566723 TSGA10IPQ3SY00 556 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 TMCO2Q7Z6W1 182 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-208ENST00000566723 MICALL1Q8N3F8 863 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 ARNTL2Q8WYA1 636 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 TCEANC2Q96MN5 208 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 ZBED2Q9BTP6 218 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 BRWD1Q9NSI6 2320 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 NLRC5Q86WI3 1866 aa17.44■□□□□ 0.38
SMPD3-208ENST00000566723 TCF20Q9UGU0 1960 aaKnown RBP17.43■□□□□ 0.38
SMPD3-208ENST00000566723 LCHNA4D1U4 455 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 RFXAPO00287 272 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-208ENST00000566723 GJB5O95377 273 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 GNAT1P11488 350 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 ITGB5P18084 799 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 POU3F3P20264 500 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-208ENST00000566723 MTMR1Q13613 665 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 KRT32Q14532 448 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 RTN1Q16799 776 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 UTP14CQ5TAP6 766 aaKnown RBP17.43■□□□□ 0.38
SMPD3-208ENST00000566723 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 PPP1R18Q6NYC8 613 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
SMPD3-208ENST00000566723 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 EHMT1Q9H9B1 1298 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 SETD4Q9NVD3 440 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms