RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 COL20A1Q9P218 1284 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 EEF1GP26641 437 aaKnown RBP12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 STAT3P40763 770 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 UBXN1Q04323 297 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 TRIM14Q14142 442 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 PLS1Q14651 629 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 TMTC1Q8IUR5 882 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 GLT8D2Q9H1C3 349 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 ABHD10Q9NUJ1 306 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
PDXDC1-214ENST00000566633 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 ZNF76P36508 570 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.487e-14■■□□□ 13.4
PDXDC1-214ENST00000566633 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 ZNF507Q8TCN5 953 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 CRYGNQ8WXF5 182 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 DUSP9Q99956 384 aaKnown RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 ZBED4O75132 1171 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 H2AFXP16104 143 aaPredicted RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 NF2P35240 595 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 AMPD3Q01432 767 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 PDE4DQ08499 809 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 STK4Q13043 487 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 NSMFQ6X4W1 530 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 GADL1Q6ZQY3 521 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 MB21D1Q8N884 522 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 CALML4Q96GE6 196 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 CARD6Q9BX69 1037 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
PDXDC1-214ENST00000566633 A0A0U1RQJ8 604 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 LGALS16A8MUM7 142 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 PIK3CDO00329 1044 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 TADA3O75528 432 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 SREBF1P36956 1147 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 USP11P51784 963 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ERVK-24P63145 666 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 GRB10Q13322 594 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 PDIA5Q14554 519 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 COG2Q14746 738 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 TMEM132BQ14DG7 1078 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 MNS1Q8NEH6 495 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 UBXN4Q92575 508 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 CCDC47Q96A33 483 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 LZTFL1Q9NQ48 299 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 MRFAP1Q9Y605 127 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 A0A1W2PQC6 194 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 CCNE1P24864 410 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 DSG3P32926 999 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 KRT9P35527 623 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ASIC1P78348 528 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ECM1Q16610 540 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 SNRNP48Q6IEG0 339 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 CYP26C1Q6V0L0 522 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 P2RX5Q93086 422 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 LENG9Q96B70 501 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 EXOC1Q9NV70 894 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 ABCB11O95342 1321 aa12.03□□□□□ -0.48
PDXDC1-214ENST00000566633 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 FOSP01100 380 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 FCER1AP12319 257 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 ARHGAP29Q52LW3 1261 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 ANKRD40Q6AI12 368 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 OPTNQ96CV9 577 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 PNMA5Q96PV4 448 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.48
PDXDC1-214ENST00000566633 BICDL2A1A5D9 508 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 PPP1R2P41236 205 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 SV2BQ7L1I2 683 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 IL31RAQ8NI17 732 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 C12orf42Q96LP6 360 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 KCNMB3Q9NPA1 279 aa12.02□□□□□ -0.49
PDXDC1-214ENST00000566633 MAGEC2Q9UBF1 373 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms