RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 ECE2O60344 883 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 CHRNA5P30532 468 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 NFIAQ12857 509 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 EBAG9O00559 213 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 CYTH3O43739 400 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 GYS1P13807 737 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 SEPT7Q16181 437 aaKnown RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 FAM102BQ5T8I3 360 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 KCTD16Q68DU8 428 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 FAM186BQ8IYM0 893 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 GUF1Q8N442 669 aaKnown RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 JMJD4Q9H9V9 463 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 NCK2O43639 380 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 SLC37A4O43826 429 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 GFPT2O94808 682 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 CTNNA2P26232 953 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 CCDC26Q8TAB7 109 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 L2HGDHQ9H9P8 463 aa12.71□□□□□ -0.37
CDH1-210ENST00000566612 METTL14Q9HCE5 456 aaKnown RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 LARSQ9P2J5 1176 aaKnown RBP12.71□□□□□ -0.37
CDH1-210ENST00000566612 ATP1A2P50993 1020 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 PMS1P54277 932 aaKnown RBP12.71□□□□□ -0.38
CDH1-210ENST00000566612 PAK2Q13177 524 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 FAM83BQ5T0W9 1011 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 INTS13Q9NVM9 706 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 TSKSQ9UJT2 592 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 STK24Q9Y6E0 443 aa12.71□□□□□ -0.38
CDH1-210ENST00000566612 KRIT1O00522 736 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 ZNF185O15231 689 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 ERVK-24P63145 666 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 XKR9Q5GH70 373 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
CDH1-210ENST00000566612 A0A1W2PQC6 194 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 GCNT4Q9P109 453 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 ATP8B1O43520 1251 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 SLURP2P0DP57 97 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 VSNL1P62760 191 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 PPM1KQ8N3J5 372 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 DPH5Q9H2P9 285 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 PICK1Q9NRD5 415 aa12.7□□□□□ -0.38
CDH1-210ENST00000566612 CHD2O14647 1828 aaKnown RBP12.7□□□□□ -0.38
CDH1-210ENST00000566612 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
CDH1-210ENST00000566612 SRGNP10124 158 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 BCRP11274 1271 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 NFRKBQ6P4R8 1299 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 PLVAPQ9BX97 442 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 NDUFAB1O14561 156 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 ZBED4O75132 1171 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 SELENOSQ9BQE4 189 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
CDH1-210ENST00000566612 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
CDH1-210ENST00000566612 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
CDH1-210ENST00000566612 SERPING1P05155 500 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 PPP1R7Q15435 360 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 SH2D3AQ9BRG2 576 aa12.69□□□□□ -0.38
CDH1-210ENST00000566612 A0A0U1RQJ8 604 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 GOLGA6L7A0A1B0GV03 622 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 RNF40O75150 1001 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 PDIA5Q14554 519 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 ARHGEF16Q5VV41 709 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 ADAM21Q9UKJ8 722 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 UTP11Q9Y3A2 253 aaKnown RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 DUSP10Q9Y6W6 482 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 FAM237AA0A1B0GTK4 181 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 ALKBH5Q6P6C2 394 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms