RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PIK3AP1Q6ZUJ8 805 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 NAP1L4Q99733 375 aaKnown RBP29.69■■■□□ 2.34
NME3-209ENST00000566600 SDF4Q9BRK5 362 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 AGO4Q9HCK5 861 aaKnown RBP29.69■■■□□ 2.34
NME3-209ENST00000566600 NFASCO94856 1347 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 CYP3A7-CYP3A51PA0A087WV96 503 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 A0A0U1RQG5 324 aaPredicted RBP29.68■■■□□ 2.34
NME3-209ENST00000566600 SORBS3O60504 671 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 CYP3A7P24462 503 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 GUCY1B3Q02153 619 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 NR5A1Q13285 461 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 LRRC26Q2I0M4 334 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 HSDL1Q3SXM5 330 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 PRR16Q569H4 304 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 NEK8Q86SG6 692 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 HSCBQ8IWL3 235 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 TNFRSF25Q93038 417 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 PKD2L1Q9P0L9 805 aa29.68■■■□□ 2.34
NME3-209ENST00000566600 EVI5O60447 810 aa29.67■■■□□ 2.34
NME3-209ENST00000566600 HOXD8P13378 290 aaPredicted RBP29.67■■■□□ 2.34
NME3-209ENST00000566600 MKI67P46013 3256 aaKnown RBP29.66■■■□□ 2.34
NME3-209ENST00000566600 GNL2Q13823 731 aaKnown RBP29.66■■■□□ 2.34
NME3-209ENST00000566600 Q4G0T1 1027 aa29.66■■■□□ 2.34
NME3-209ENST00000566600 INTS4Q96HW7 963 aaKnown RBP29.66■■■□□ 2.34
NME3-209ENST00000566600 ZNF577Q9BSK1 485 aa29.66■■■□□ 2.34
NME3-209ENST00000566600 FOXP1Q9H334 677 aaPredicted RBP29.66■■■□□ 2.34
NME3-209ENST00000566600 BCAS3Q9H6U6 928 aa29.66■■■□□ 2.34
NME3-209ENST00000566600 JPH1Q9HDC5 661 aaPredicted RBP29.66■■■□□ 2.34
NME3-209ENST00000566600 NR2E3Q9Y5X4 410 aa29.66■■■□□ 2.34
NME3-209ENST00000566600 IPO5O00410 1097 aaKnown RBP29.65■■■□□ 2.34
NME3-209ENST00000566600 EDIL3O43854 480 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 GCFC2P16383 781 aaKnown RBP29.65■■■□□ 2.34
NME3-209ENST00000566600 RTP1P59025 263 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 GPR20Q99678 358 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 TBC1D22BQ9NU19 505 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 SLC9A2Q9UBY0 812 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 MROH7Q68CQ1 1323 aa29.65■■■□□ 2.34
NME3-209ENST00000566600 ITGA7Q13683 1181 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 LETM2Q2VYF4 491 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 PPP4R3AQ6IN85 833 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 LENG9Q96B70 501 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 MBOAT7Q96N66 472 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 KATNAL1Q9BW62 490 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 ATP11BQ9Y2G3 1177 aa29.64■■■□□ 2.34
NME3-209ENST00000566600 TNRC18O15417 2968 aaPredicted RBP29.64■■■□□ 2.33
NME3-209ENST00000566600 ARVCFO00192 962 aa29.63■■■□□ 2.33
NME3-209ENST00000566600 ITGB3BPQ13352 177 aaPredicted RBP29.63■■■□□ 2.33
NME3-209ENST00000566600 TCEAL9Q9UHQ7 104 aa29.63■■■□□ 2.33
NME3-209ENST00000566600 DOCK5Q9H7D0 1870 aa29.63■■■□□ 2.33
NME3-209ENST00000566600 H3BQV1 296 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 TDP2O95551 362 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 SP4Q02446 784 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 EARS2Q5JPH6 523 aaKnown RBP29.62■■■□□ 2.33
NME3-209ENST00000566600 SLC43A3Q8NBI5 491 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 SEPT1Q8WYJ6 367 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 TOX2Q96NM4 488 aa29.62■■■□□ 2.33
NME3-209ENST00000566600 DDX25Q9UHL0 483 aaKnown RBP29.62■■■□□ 2.33
NME3-209ENST00000566600 ALPK3Q96L96 1907 aa29.61■■■□□ 2.33
NME3-209ENST00000566600 CDK7P50613 346 aa29.61■■■□□ 2.33
NME3-209ENST00000566600 PSMC6P62333 389 aa29.61■■■□□ 2.33
NME3-209ENST00000566600 TRIM60Q495X7 471 aa29.61■■■□□ 2.33
NME3-209ENST00000566600 LARP1BQ659C4 914 aaKnown RBP29.61■■■□□ 2.33
NME3-209ENST00000566600 ANKRD33Q7Z3H0 272 aa29.61■■■□□ 2.33
NME3-209ENST00000566600 FAM205CA6NFA0 338 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 MSH4O15457 936 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 CCNT1O60563 726 aaKnown RBP29.6■■■□□ 2.33
NME3-209ENST00000566600 F2P00734 622 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 PDCP20941 246 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 NFRKBQ6P4R8 1299 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 NOSTRINQ8IVI9 506 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 C7orf61Q8IZ16 206 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 RIT2Q99578 217 aa29.6■■■□□ 2.33
NME3-209ENST00000566600 SCN10AQ9Y5Y9 1956 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 PDE4DIPQ5VU43 2346 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 DCDC2CA8MYV0 355 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 DHX15O43143 795 aaKnown RBP29.59■■■□□ 2.33
NME3-209ENST00000566600 LGALS2P05162 132 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 ZNF286BP0CG31 522 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 TCF7P36402 384 aaPredicted RBP29.59■■■□□ 2.33
NME3-209ENST00000566600 TLE2Q04725 743 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 PTPN11Q06124 597 aaPredicted RBP29.59■■■□□ 2.33
NME3-209ENST00000566600 NBPF20Q3BBV1 942 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 KAT2BQ92831 832 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 SLC5A5Q92911 643 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 C16orf70Q9BSU1 422 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 GRIN2DO15399 1336 aa29.59■■■□□ 2.33
NME3-209ENST00000566600 DNAH12Q6ZR08 3092 aa29.58■■■□□ 2.33
NME3-209ENST00000566600 GSTTP1A0A1W2PQM5 241 aa29.58■■■□□ 2.33
NME3-209ENST00000566600 TLR3O15455 904 aaKnown RBP29.58■■■□□ 2.33
NME3-209ENST00000566600 PQBP1O60828 265 aaKnown RBP29.58■■■□□ 2.33
NME3-209ENST00000566600 U2AF2P26368 475 aaKnown RBP eCLIP29.58■■■□□ 2.33
NME3-209ENST00000566600 PSEN2P49810 448 aa29.58■■■□□ 2.33
NME3-209ENST00000566600 ACTR2P61160 394 aa29.58■■■□□ 2.33
NME3-209ENST00000566600 KRT76Q01546 638 aa29.58■■■□□ 2.33
NME3-209ENST00000566600 ZNF215Q9UL58 517 aaPredicted RBP29.58■■■□□ 2.33
NME3-209ENST00000566600 H3BRB1 525 aa29.57■■■□□ 2.32
NME3-209ENST00000566600 GAS7O60861 476 aa29.57■■■□□ 2.32
NME3-209ENST00000566600 MFSD10Q14728 455 aa29.57■■■□□ 2.32
NME3-209ENST00000566600 ZNF746Q6NUN9 644 aaPredicted RBP29.57■■■□□ 2.32
NME3-209ENST00000566600 TUT1Q9H6E5 874 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms