RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 CHST13Q8NET6 341 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 DHTKD1Q96HY7 919 aaPredicted RBP9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 MED15Q96RN5 788 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 RAVER2Q9HCJ3 691 aaKnown RBP9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 NFE2L3Q9Y4A8 694 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 LOXHD1Q8IVV2 1947 aa9.92□□□□□ -0.82
LSM3P5-201ENST00000566307 COL11A1P12107 1806 aaPredicted RBP9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 SYNRGQ9UMZ2 1314 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 FRMD3A2A2Y4 597 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 LRRC10BA6NIK2 292 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 POTECB2RU33 542 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 PTMAP06454 111 aaKnown RBP9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 GSDMDP57764 484 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 RPS6P62753 249 aaKnown RBP9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 FMR1Q06787 632 aaKnown RBP eCLIP9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 PAK1Q13153 545 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 RNF207Q6ZRF8 634 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 OTOP1Q7RTM1 612 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 CTAGE1Q96RT6 745 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 BLZF1Q9H2G9 400 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 ACAD9Q9H845 621 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 JADE2Q9NQC1 790 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 RNF146Q9NTX7 359 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 EXOC1Q9NV70 894 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 FANCLQ9NW38 375 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 COL20A1Q9P218 1284 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
LSM3P5-201ENST00000566307 BICDL2A1A5D9 508 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 MYMKA6NI61 221 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 PSMA7O14818 248 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 SPATA31C1P0DKV0 1188 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 TAL1P17542 331 aaPredicted RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 CASP1P29466 404 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 STAT3P40763 770 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 ASIC1P78348 528 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 PABPC4Q13310 644 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 DGKZQ13574 1117 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 MCM6Q14566 821 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 TMEM132BQ14DG7 1078 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 PGM5Q15124 567 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 EPHA7Q15375 998 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 MUM1L1Q5H9M0 696 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 LRCH2Q5VUJ6 765 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 FASTKD5Q7L8L6 764 aaKnown RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 KCNK18Q7Z418 384 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 RIOX2Q8IUF8 465 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 CPXCR1Q8N123 301 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 SYT2Q8N9I0 419 aaPredicted RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 DNERQ8NFT8 737 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 RDM1Q8NG50 284 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 GTF3C2Q8WUA4 911 aaPredicted RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 STAMQ92783 540 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 DNAJC19Q96DA6 116 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 PDCD2LQ9BRP1 358 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 TEKT3Q9BXF9 490 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 TBC1D22BQ9NU19 505 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 KCND2Q9NZV8 630 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 DNM3Q9UQ16 869 aa9.9□□□□□ -0.82
LSM3P5-201ENST00000566307 PFASO15067 1338 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 LOC102724159A0A0B4J2E5 919 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 DHX15O43143 795 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 GAS7O60861 476 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 MED24O75448 989 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 LYPLA2O95372 231 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 EYA4O95677 639 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 PLA2G4BP0C869 781 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 ITGB5P18084 799 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 CCNE1P24864 410 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 CLCN1P35523 988 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 PRCPP42785 496 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 SLC12A3P55017 1021 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 MRPS9P82933 396 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 PDE4DQ08499 809 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 PWP2Q15269 919 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 ECM1Q16610 540 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 SNRNP48Q6IEG0 339 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 CATSPER3Q86XQ3 398 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 CYP2W1Q8TAV3 490 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 NSUN6Q8TEA1 469 aaKnown RBP9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 NELFBQ8WX92 580 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 DDX12PQ92771 950 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 CDHR1Q96JP9 859 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 IWS1Q96ST2 819 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 SENP7Q9BQF6 1050 aa9.89□□□□□ -0.83
LSM3P5-201ENST00000566307 EIF2AK1Q9BQI3 630 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms