RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 ZNF689Q96CS4 500 aaPredicted RBP19.63■□□□□ 0.73
CLK3-217ENST00000566126 IL17RBQ9NRM6 502 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
CLK3-217ENST00000566126 STX8Q9UNK0 236 aa19.63■□□□□ 0.73
CLK3-217ENST00000566126 HOXD8P13378 290 aaPredicted RBP19.62■□□□□ 0.73
CLK3-217ENST00000566126 TDO2P48775 406 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 SYDE2Q5VT97 1194 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 ASTLQ6HA08 431 aaPredicted RBP19.62■□□□□ 0.73
CLK3-217ENST00000566126 PPTC7Q8NI37 304 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 APBB2Q92870 758 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 OSBP2Q969R2 916 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 TTC3P53804 2025 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 PLXNA4Q9HCM2 1894 aa19.62■□□□□ 0.73
CLK3-217ENST00000566126 NMT2O60551 498 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 BRD1O95696 1058 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 HOXC8P31273 242 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 BTG3Q14201 252 aaPredicted RBP19.61■□□□□ 0.73
CLK3-217ENST00000566126 PUM1Q14671 1186 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLK3-217ENST00000566126 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 HSP90AB4PQ58FF6 505 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 VN1R2Q8NFZ6 395 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 ATP8B4Q8TF62 1192 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 ATP6V0A1Q93050 837 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
CLK3-217ENST00000566126 MAP1BP46821 2468 aaKnown RBP19.61■□□□□ 0.73
CLK3-217ENST00000566126 TREHO43280 583 aa19.6■□□□□ 0.73
CLK3-217ENST00000566126 ZKSCAN2Q63HK3 967 aa19.6■□□□□ 0.73
CLK3-217ENST00000566126 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
CLK3-217ENST00000566126 POF1BQ8WVV4 589 aa19.6■□□□□ 0.73
CLK3-217ENST00000566126 SMOC2Q9H3U7 446 aa19.6■□□□□ 0.73
CLK3-217ENST00000566126 SP100P23497 879 aaPredicted RBP19.59■□□□□ 0.73
CLK3-217ENST00000566126 LAMC2Q13753 1193 aa19.59■□□□□ 0.73
CLK3-217ENST00000566126 UBALD2Q8IYN6 164 aa19.59■□□□□ 0.73
CLK3-217ENST00000566126 KIAA2013Q8IYS2 634 aa19.59■□□□□ 0.73
CLK3-217ENST00000566126 SORCS3Q9UPU3 1222 aa19.59■□□□□ 0.73
CLK3-217ENST00000566126 MRPL42Q9Y6G3 142 aaKnown RBP19.59■□□□□ 0.73
CLK3-217ENST00000566126 SPTBN2O15020 2390 aa19.58■□□□□ 0.73
CLK3-217ENST00000566126 C17orf102A2RUQ5 167 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 CAND2O75155 1236 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 ARP10275 920 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 MTMR3Q13615 1198 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 NAALADL2Q58DX5 795 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 IFNL3Q8IZI9 196 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 KLHL23Q8NBE8 558 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 C16orf70Q9BSU1 422 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 S1PR5Q9H228 398 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 DLL3Q9NYJ7 618 aa19.58■□□□□ 0.72
CLK3-217ENST00000566126 FRMPD2Q68DX3 1309 aaPredicted RBP19.57■□□□□ 0.72
CLK3-217ENST00000566126 PER2O15055 1255 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 GPAA1O43292 621 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 DGKIO75912 1065 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 NOVP48745 357 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 PPP4R3BQ5MIZ7 849 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 TBC1D5Q92609 795 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 TAAR1Q96RJ0 339 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 TLE6Q9H808 572 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 GPCPD1Q9NPB8 672 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 COL20A1Q9P218 1284 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 CHD8Q9HCK8 2581 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 OTOGLQ3ZCN5 2332 aa19.57■□□□□ 0.72
CLK3-217ENST00000566126 WDR19Q8NEZ3 1342 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 PPFIA4O75335 1185 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 APPP05067 770 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 RLBP1P12271 317 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 CLCN5P51795 746 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 STXBP2Q15833 593 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 HSDL1Q3SXM5 330 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 RNPEPQ9H4A4 650 aa19.56■□□□□ 0.72
CLK3-217ENST00000566126 ENPP3O14638 875 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 SMIM10L2AP0DMW4 78 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 SMIM10L2BP0DMW5 78 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 GNAT2P19087 354 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 FAM26DQ5JW98 314 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 CWF19L1Q69YN2 538 aaKnown RBP19.55■□□□□ 0.72
CLK3-217ENST00000566126 APPBP2Q92624 585 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 NEK1Q96PY6 1258 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 PNMA2Q9UL42 364 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLK3-217ENST00000566126 MRVI1Q9Y6F6 885 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 USP24Q9UPU5 2620 aa19.55■□□□□ 0.72
CLK3-217ENST00000566126 TSPY2A6NKD2 308 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 PATL2C9JE40 543 aaKnown RBP19.54■□□□□ 0.72
CLK3-217ENST00000566126 M0R2C6 588 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 SORBS3O60504 671 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 LMNAP02545 664 aaKnown RBP19.54■□□□□ 0.72
CLK3-217ENST00000566126 PPARAQ07869 468 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 ANGPT1Q15389 498 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 DUSP6Q16828 381 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 SYTL5Q8TDW5 730 aaPredicted RBP19.54■□□□□ 0.72
CLK3-217ENST00000566126 NSUN6Q8TEA1 469 aaKnown RBP19.54■□□□□ 0.72
CLK3-217ENST00000566126 IWS1Q96ST2 819 aa19.54■□□□□ 0.72
CLK3-217ENST00000566126 PI15O43692 258 aa19.53■□□□□ 0.72
CLK3-217ENST00000566126 KCNC3Q14003 757 aa19.53■□□□□ 0.72
CLK3-217ENST00000566126 SYCE2Q6PIF2 218 aa19.53■□□□□ 0.72
CLK3-217ENST00000566126 KCNG4Q8TDN1 519 aa19.53■□□□□ 0.72
CLK3-217ENST00000566126 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms