RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
CDH1-208ENST00000565810 AK8Q96MA6 479 aa8.78□□□□□ -1
CDH1-208ENST00000565810 UIMC1Q96RL1 719 aa8.78□□□□□ -1
CDH1-208ENST00000565810 KATNBL1Q9H079 304 aa8.78□□□□□ -1
CDH1-208ENST00000565810 SPC25Q9HBM1 224 aa8.78□□□□□ -1
CDH1-208ENST00000565810 GDPD2Q9HCC8 539 aa8.78□□□□□ -1
CDH1-208ENST00000565810 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
CDH1-208ENST00000565810 PDGFCQ9NRA1 345 aa8.78□□□□□ -1
CDH1-208ENST00000565810 ELP1O95163 1332 aa8.78□□□□□ -1
CDH1-208ENST00000565810 WDR64B1ANS9 1081 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 NOP56O00567 594 aaKnown RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 SEPT4O43236 478 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 PSMD10O75832 226 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 ARIH2O95376 493 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 GGPS1O95749 300 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 GH1P01241 217 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 IGHA2P01877 340 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 INHAP05111 366 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 KCNA2P16389 499 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 UBA1P22314 1058 aaKnown RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 SFNP31947 248 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 UBA7P41226 1012 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 CACNB2Q08289 660 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 SLC9C1Q4G0N8 1177 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 DUSP28Q4G0W2 176 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 BRDTQ58F21 947 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 CELF3Q5SZQ8 465 aaKnown RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 KRT79Q5XKE5 535 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 ADALQ6DHV7 355 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 NCAPH2Q6IBW4 605 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 ZNF746Q6NUN9 644 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 CCDC62Q6P9F0 684 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 FBXO46Q6PJ61 603 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 METTL7BQ6UX53 244 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 SMAP1Q8IYB5 467 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 ZNF579Q8NAF0 562 aaKnown RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 RDM1Q8NG50 284 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 RASSF8Q8NHQ8 419 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 AP5M1Q9H0R1 490 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 HMX1Q9NP08 348 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 FAM13BQ9NYF5 915 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 SLC9A2Q9UBY0 812 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 LRWD1Q9UFC0 647 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 FBXO2Q9UK22 296 aaPredicted RBP8.77□□□□□ -1.01
CDH1-208ENST00000565810 PCDHA7Q9UN72 937 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 SAMM50Q9Y512 469 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 MYH6P13533 1939 aa8.77□□□□□ -1.01
CDH1-208ENST00000565810 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 DHX15O43143 795 aaKnown RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 DYNC1LI2O43237 492 aaPredicted RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 CHMP2AO43633 222 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 MSCO60682 206 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 DKC1O60832 514 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDH1-208ENST00000565810 DUSP11O75319 330 aaKnown RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 PRPF40AO75400 957 aaKnown RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 RARBP10826 455 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 CYBAP13498 195 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SMPD1P17405 629 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 PTMSP20962 102 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 JAK3P52333 1124 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SP2Q02086 613 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SP4Q02446 784 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 TRIM32Q13049 653 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 ITGB3BPQ13352 177 aaPredicted RBP8.76□□□□□ -1.01
CDH1-208ENST00000565810 PPP2R5CQ13362 524 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 EPHA7Q15375 998 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 MAP3K21Q5TCX8 1036 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 HAUS3Q68CZ6 603 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 MIS18BP1Q6P0N0 1132 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 MIER3Q7Z3K6 550 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 TMEM87AQ8NBN3 555 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 OR6J1Q8NGC5 347 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SEPT1Q8WYJ6 367 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 GJA10Q969M2 543 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 CDK5RAP3Q96JB5 506 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SPATA33Q96N06 139 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 CLIC6Q96NY7 704 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 CSRNP2Q9H175 543 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 DISC1Q9NRI5 854 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 Q9Y3F1 56 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 PCDHA10Q9Y5I2 948 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 SMCHD1A6NHR9 2005 aa8.76□□□□□ -1.01
CDH1-208ENST00000565810 A0A1W2PQ27 194 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 A0A1W2PQ64 194 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 A0A1W2PQD8 194 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 DDX11L8A8MPP1 907 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 BACH1O14867 736 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 SLC26A4O43511 780 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 ZEB2O60315 1214 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 SORBS3O60504 671 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 FARP2O94887 1054 aaPredicted RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 P4HBP07237 508 aaKnown RBP8.75□□□□□ -1.01
CDH1-208ENST00000565810 PSAPP07602 524 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 CMA1P23946 247 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 CPT1AP50416 773 aa8.75□□□□□ -1.01
CDH1-208ENST00000565810 ACTR2P61160 394 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms