RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 ADAM23O75077 832 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 PROCP04070 461 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 GJA9P57773 515 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 KLRC3Q07444 240 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 AKNAD1Q5T1N1 836 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 RASIP1Q5U651 963 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 ZNF444Q8N0Y2 327 aaPredicted RBP9.9□□□□□ -0.82
CDH13-207ENST00000565636 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 SLC44A5Q8NCS7 719 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 GMCL1P1Q8NEA9 526 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
CDH13-207ENST00000565636 CHURC1Q8WUH1 139 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 DYNLL2Q96FJ2 89 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 STRBPQ96SI9 672 aaKnown RBP9.9□□□□□ -0.82
CDH13-207ENST00000565636 LRRCC1Q9C099 1032 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 SLC38A10Q9HBR0 1119 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 STARD7Q9NQZ5 370 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 PNMA2Q9UL42 364 aa9.9□□□□□ -0.82
CDH13-207ENST00000565636 PRUNE2Q8WUY3 3088 aa9.9□□□□□ -0.83
CDH13-207ENST00000565636 KRBA1A5PL33 1030 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 ASB14A6NK59 587 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 PIK3CDO00329 1044 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 TLR3O15455 904 aaKnown RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 SNAI1O95863 264 aaPredicted RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 CD33P20138 364 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH13-207ENST00000565636 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 KCNA10Q16322 511 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 C9orf50Q5SZB4 431 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 SIRT2Q8IXJ6 389 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 KBTBD3Q8NAB2 608 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 GPATCH3Q96I76 525 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 RNPC3Q96LT9 517 aaKnown RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 MTIF3Q9H2K0 278 aaKnown RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 ALG2Q9H553 416 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 PRDM5Q9NQX1 630 aaPredicted RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 ECHDC1Q9NTX5 307 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 MARK1Q9P0L2 795 aa9.89□□□□□ -0.83
CDH13-207ENST00000565636 SCHIP1Q9P0W5 487 aaPredicted RBP9.89□□□□□ -0.83
CDH13-207ENST00000565636 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 A0A0U1RQG5 324 aaPredicted RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 GSG1L2A8MUP6 293 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 ARVCFO00192 962 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PRKAB2O43741 272 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 ZEB2O60315 1214 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 TTLL1O95922 423 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PGK1P00558 417 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 SLC3A2P08195 630 aaKnown RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 RASA1P20936 1047 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 NT5C2P49902 561 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PDE4BQ07343 736 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 NCOA4Q13772 614 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 FAM83BQ5T0W9 1011 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 SNRNP48Q6IEG0 339 aaKnown RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 PSRC1Q6PGN9 363 aaPredicted RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 CHSY3Q70JA7 882 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 FAM160B2Q86V87 743 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PANK1Q8TE04 598 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 ATXN2LQ8WWM7 1075 aaKnown RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 APPBP2Q92624 585 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 FERMT2Q96AC1 680 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 PUS7LQ9H0K6 701 aaKnown RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 MTMR4Q9NYA4 1195 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 TBX21Q9UL17 535 aa9.88□□□□□ -0.83
CDH13-207ENST00000565636 CTDP1Q9Y5B0 961 aaPredicted RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 GPC6Q9Y625 555 aaPredicted RBP9.88□□□□□ -0.83
CDH13-207ENST00000565636 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
CDH13-207ENST00000565636 RNF113AO15541 343 aaKnown RBP9.87□□□□□ -0.83
CDH13-207ENST00000565636 ITGB2P05107 769 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 PGK2P07205 417 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 CYP2D6P10635 497 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 FOSL2P15408 326 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 ALAS2P22557 587 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 COL8A1P27658 744 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 DGKGP49619 791 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 ATP1A2P50993 1020 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 RAB30Q15771 203 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
CDH13-207ENST00000565636 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
CDH13-207ENST00000565636 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 ANKRD35Q8N283 1001 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 ZNF576Q9H609 170 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 DCTPP1Q9H773 170 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 PRDM6Q9NQX0 595 aa9.87□□□□□ -0.83
CDH13-207ENST00000565636 FBXO28Q9NVF7 368 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms