RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CEP55Q53EZ4 464 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 ARHGEF16Q5VV41 709 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 E4F1Q66K89 784 aaPredicted RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLC30A10Q6XR72 485 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 NCAPG2Q86XI2 1143 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 ANKRD35Q8N283 1001 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 SHCBP1Q8NEM2 672 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 NSUN6Q8TEA1 469 aaKnown RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 HAS1Q92839 578 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 HHIPL1Q96JK4 782 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 TAAR1Q96RJ0 339 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCSER1Q9C0I3 900 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 MROH8Q9H579 483 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 PCDHA12Q9UN75 941 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
CNEP1R1-206ENST00000565556 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 FAM86B1E9PN63 330 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 MEIS1O00470 390 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 CBFA2T2O43439 604 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLC26A4O43511 780 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 SLC10A3P09131 477 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 BCRP11274 1271 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 H2AFXP16104 143 aaPredicted RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 TECP42680 631 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 BMS1Q14692 1282 aaKnown RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ARMCX5Q6P1M9 558 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 USP49Q70CQ1 688 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 IQUBQ8NA54 791 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 GPRC5AQ8NFJ5 357 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 LENG9Q96B70 501 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 MXRA8Q9BRK3 442 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 PXMP2Q9NR77 195 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 V9GYY5 206 aaPredicted RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 B4DLN1 442 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 STAM2O75886 525 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 CYP2C8P10632 490 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ERCC3P19447 782 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 CCND2P30279 289 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ERVK-24P63145 666 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 UBXN2AP68543 259 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 PGM5Q15124 567 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 LONRF3Q496Y0 759 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 KRBA2Q6ZNG9 492 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 IWS1Q96ST2 819 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 SRRTQ9BXP5 876 aaKnown RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 ABT1Q9ULW3 272 aaKnown RBP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
CNEP1R1-206ENST00000565556 MSH4O15457 936 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 EIF2AK2P19525 551 aaKnown RBP10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 CABP7Q86V35 215 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 PDILTQ8N807 584 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 ERCC4Q92889 916 aaPredicted RBP10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 CALML4Q96GE6 196 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 PTPN18Q99952 460 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 MORF4L1Q9UBU8 362 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 ADD3Q9UEY8 706 aaKnown RBP10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 UBIAD1Q9Y5Z9 338 aa10.52□□□□□ -0.73
CNEP1R1-206ENST00000565556 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 MAFGO15525 162 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 NR3C2P08235 984 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 ETF1P62495 437 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 FANCCQ00597 558 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 KCTD2Q14681 263 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 NCAPHQ15003 741 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 Q3C1V9 767 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 KRT79Q5XKE5 535 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 VSIG10LQ86VR7 867 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 ERMNQ8TAM6 284 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 CYP2W1Q8TAV3 490 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 SLC5A5Q92911 643 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 DHX58Q96C10 678 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 RIT2Q99578 217 aa10.51□□□□□ -0.73
CNEP1R1-206ENST00000565556 CUEDC2Q9H467 287 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms