RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 ATP9AO75110 1047 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 DAGLBQ8NCG7 672 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 GPR20Q99678 358 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 TRPV6Q9H1D0 765 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
COMMD4-212ENST00000565517 KCNH7Q9NS40 1196 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 LIMCH1Q9UPQ0 1083 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 KAT6AQ92794 2004 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 SORBS3O60504 671 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 LARGE1O95461 756 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 XBP1P17861 261 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 ZNF76P36508 570 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 PSEN2P49810 448 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 MFSD5Q6N075 450 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 TDHQ8IZJ6 230 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 CYP2W1Q8TAV3 490 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 WASF1Q92558 559 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
COMMD4-212ENST00000565517 RANBP2P49792 3224 aaKnown RBP17.59■□□□□ 0.41
COMMD4-212ENST00000565517 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-212ENST00000565517 NFASCO94856 1347 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 M0R2N6 131 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 CIITAP33076 1130 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 USP11P51784 963 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 MFSD10Q14728 455 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 KIAA0753Q2KHM9 967 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 BLIDQ8IZY5 108 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 HIPK3Q9H422 1215 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 TRMT13Q9NUP7 481 aaKnown RBP17.58■□□□□ 0.4
COMMD4-212ENST00000565517 PCDH10Q9P2E7 1040 aa17.58■□□□□ 0.4
COMMD4-212ENST00000565517 ORC3Q9UBD5 711 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-212ENST00000565517 H3BRB1 525 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 LGALS2P05162 132 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 ARP10275 920 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 FPGSQ05932 587 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 NPY5RQ15761 445 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
COMMD4-212ENST00000565517 RASGRP4Q8TDF6 673 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 SEPT1Q8WYJ6 367 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-212ENST00000565517 PHF20Q9BVI0 1012 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 NOC4LQ9BVI4 516 aaKnown RBP17.57■□□□□ 0.4
COMMD4-212ENST00000565517 TUT1Q9H6E5 874 aaKnown RBP17.57■□□□□ 0.4
COMMD4-212ENST00000565517 AGO4Q9HCK5 861 aaKnown RBP17.57■□□□□ 0.4
COMMD4-212ENST00000565517 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
COMMD4-212ENST00000565517 IGLV3-22A0A075B6J6 115 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 FAM86B1E9PN63 330 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 FAM86B2P0C5J1 330 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 FDPSP14324 419 aaKnown RBP17.56■□□□□ 0.4
COMMD4-212ENST00000565517 CHMP4BP1P59074 171 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-212ENST00000565517 RABEP1Q15276 862 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 JPH1Q9HDC5 661 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-212ENST00000565517 HDAC6Q9UBN7 1215 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 SLC9A2Q9UBY0 812 aa17.56■□□□□ 0.4
COMMD4-212ENST00000565517 GSTTP1A0A1W2PQM5 241 aa17.55■□□□□ 0.4
COMMD4-212ENST00000565517 PPIGQ13427 754 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■■■■ 27.3
COMMD4-212ENST00000565517 PTGISQ16647 500 aa17.55■□□□□ 0.4
COMMD4-212ENST00000565517 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
COMMD4-212ENST00000565517 GDF6Q6KF10 455 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-212ENST00000565517 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
COMMD4-212ENST00000565517 PPP1R12CQ9BZL4 782 aa17.55■□□□□ 0.4
COMMD4-212ENST00000565517 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-212ENST00000565517 ZNF215Q9UL58 517 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-212ENST00000565517 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
COMMD4-212ENST00000565517 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 EDIL3O43854 480 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 CYP2C9P11712 490 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 CYP2C18P33260 490 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 TCF7P36402 384 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-212ENST00000565517 FXR1P51114 621 aaKnown RBP eCLIP17.54■□□□□ 0.4
COMMD4-212ENST00000565517 SP4Q02446 784 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 ITGB3BPQ13352 177 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-212ENST00000565517 TBCKQ8TEA7 893 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 PKD2L1Q9P0L9 805 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 NOD1Q9Y239 953 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 TELO2Q9Y4R8 837 aa17.54■□□□□ 0.4
COMMD4-212ENST00000565517 IPO5O00410 1097 aaKnown RBP17.53■□□□□ 0.4
COMMD4-212ENST00000565517 ATG7O95352 703 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 CSF2RAP15509 400 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 HOXC8P31273 242 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 BFSP2Q13515 415 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
COMMD4-212ENST00000565517 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 CCDC155Q8N6L0 562 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms