RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 NLRP4Q96MN2 994 aa20.85■□□□□ 0.93
IFT140-206ENST00000565298 CALCOCO1Q9P1Z2 691 aa20.85■□□□□ 0.93
IFT140-206ENST00000565298 SFNP31947 248 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 MXI1P50539 228 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 ARHGAP4P98171 946 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 CACNB1Q02641 598 aaPredicted RBP20.84■□□□□ 0.93
IFT140-206ENST00000565298 NFX1Q12986 1120 aaKnown RBP20.84■□□□□ 0.93
IFT140-206ENST00000565298 RESTQ13127 1097 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 SCARF1Q14162 830 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
IFT140-206ENST00000565298 CPLX4Q7Z7G2 160 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 RSAD2Q8WXG1 361 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 EEF2KMTQ96G04 330 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 LPAR1Q92633 364 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
IFT140-206ENST00000565298 SAR1BQ9Y6B6 198 aa20.84■□□□□ 0.93
IFT140-206ENST00000565298 MYO1FO00160 1098 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 LDHAP00338 332 aaKnown RBP20.83■□□□□ 0.93
IFT140-206ENST00000565298 MYCP01106 439 aaPredicted RBP20.83■□□□□ 0.93
IFT140-206ENST00000565298 IFNB1P01574 187 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 SRGAP2CP0DJJ0 459 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 LONRF2Q1L5Z9 754 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 MAP7D1Q3KQU3 841 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 ELMSAN1Q6PJG2 1045 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 WDR70Q9NW82 654 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 AKR1B1P15121 316 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 PPP2R5DQ14738 602 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 MFSD14CQ5VZR4 134 aa20.83■□□□□ 0.93
IFT140-206ENST00000565298 TYW5A2RUC4 315 aaKnown RBP20.83■□□□□ 0.92
IFT140-206ENST00000565298 GEN1Q17RS7 908 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 USP17L6PQ6QN14 398 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 CYB5R4Q7L1T6 521 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 FAM149B1Q96BN6 582 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 CARD6Q9BX69 1037 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 MARK3P27448 753 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 CTTNQ14247 550 aaKnown RBP20.83■□□□□ 0.92
IFT140-206ENST00000565298 SGMS1Q86VZ5 419 aa20.83■□□□□ 0.92
IFT140-206ENST00000565298 RPF1Q9H9Y2 349 aaKnown RBP20.83■□□□□ 0.92
IFT140-206ENST00000565298 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 LY9Q9HBG7 655 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 ASB14A6NK59 587 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 LARGE1O95461 756 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 MYL3P08590 195 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 PRELPP51888 382 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 RUFY4Q6ZNE9 571 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 ZNF233A6NK53 670 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 LRRC63Q05C16 580 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 CPS1P31327 1500 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 TCP1P17987 556 aaKnown RBP20.82■□□□□ 0.92
IFT140-206ENST00000565298 COG2Q14746 738 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 SRGAP1Q7Z6B7 1085 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 FAM151AQ8WW52 585 aa20.82■□□□□ 0.92
IFT140-206ENST00000565298 CLIC2O15247 247 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 HMGCS2P54868 508 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 TOPORSQ9NS56 1045 aaPredicted RBP20.81■□□□□ 0.92
IFT140-206ENST00000565298 HYOU1Q9Y4L1 999 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 EPN1Q9Y6I3 576 aaPredicted RBP20.81■□□□□ 0.92
IFT140-206ENST00000565298 GRK7Q8WTQ7 553 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 MMP19Q99542 508 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 PCIF1Q9H4Z3 704 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 ATP6V0A4Q9HBG4 840 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 RIMS1Q86UR5 1692 aaKnown RBP20.81■□□□□ 0.92
IFT140-206ENST00000565298 DPEP1P16444 411 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 SBK1Q52WX2 424 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 ATP8B3O60423 1300 aa20.81■□□□□ 0.92
IFT140-206ENST00000565298 NMT2O60551 498 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 CRCPO75575 148 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 SLC12A2P55011 1212 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 MAPK6Q16659 721 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 BARHL2Q9NY43 387 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 MED7O43513 233 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 EZH2Q15910 746 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 BBS5Q8N3I7 341 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 PPANQ9NQ55 473 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 TOB2Q14106 344 aaPredicted RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 SAMD15Q9P1V8 674 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 NXF1Q9UBU9 619 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 A6NJR5 290 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 TNPO2O14787 897 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 PHKA2P46019 1235 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 IRX5P78411 483 aaPredicted RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 SMC1BQ8NDV3 1235 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 ENOX1Q8TC92 643 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 PSPC1Q8WXF1 523 aaKnown RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 MSTO1Q9BUK6 570 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 RPAP3Q9H6T3 665 aaPredicted RBP20.8■□□□□ 0.92
IFT140-206ENST00000565298 RWDD2AQ9UIY3 292 aa20.8■□□□□ 0.92
IFT140-206ENST00000565298 WDR46O15213 610 aaKnown RBP20.79■□□□□ 0.92
IFT140-206ENST00000565298 PEX3P56589 373 aa20.79■□□□□ 0.92
IFT140-206ENST00000565298 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
IFT140-206ENST00000565298 FAM76AQ8TAV0 307 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms