RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CIAO1O76071 339 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CYP27A1Q02318 531 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RBL2Q08999 1139 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ZC2HC1CQ53FD0 456 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 CHP1Q99653 195 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 TANGO6Q9C0B7 1094 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 NSRP1Q9H0G5 558 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 DDNO94850 711 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 COL9A2Q14055 689 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 MUM1L1Q5H9M0 696 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CATIPQ7Z7H3 387 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CCDC50Q8IVM0 306 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SRRM1Q8IYB3 904 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 HAUS1Q96CS2 278 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CRNKL1Q9BZJ0 848 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 COL24A1Q17RW2 1714 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 MYH2Q9UKX2 1941 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 LAD1O00515 517 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 BUB1O43683 1085 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ACTN4O43707 911 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 GJB1P08034 283 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SEC23AQ15436 765 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RABGGTAQ92696 567 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CASP5P51878 434 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 HTRA3P83110 453 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 MYO1EQ12965 1108 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 MCM6Q14566 821 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SMC1AQ14683 1233 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 FAM83BQ5T0W9 1011 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CC2D2BQ6DHV5 1058 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 PCIF1Q9H4Z3 704 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 AGPAT5Q9NUQ2 364 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 KIAA1468Q9P260 1216 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SEL1LQ9UBV2 794 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 FMNL1O95466 1100 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 PPARGP37231 505 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 DEUP1Q05D60 604 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 EIF2B5Q13144 721 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 LMBRD2Q68DH5 695 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 NCAPH2Q6IBW4 605 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 NLRC4Q9NPP4 1024 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 RFX7Q2KHR2 1363 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 POTEFA5A3E0 1075 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 MAN1A1P33908 653 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 RHBDL3P58872 404 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 EAPPQ56P03 285 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 POTEGQ6S5H5 508 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 POTEEQ6S8J3 1075 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 BRAPQ7Z569 592 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 LRRC8AQ8IWT6 810 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ESR2Q92731 530 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 IFT122Q9HBG6 1241 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ZCCHC17Q9NP64 241 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 EXOC1Q9NV70 894 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 TIAM2Q8IVF5 1701 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 A0A1B0GUA9 196 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 GNA11P29992 359 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 TAB3Q8N5C8 712 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 ZNF579Q8NAF0 562 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 TAF4BQ92750 862 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 VCXQ9H320 206 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PARP2Q9UGN5 583 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 FAF1Q9UNN5 650 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 ABCB11O95342 1321 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 STK10O94804 968 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 GFAPP14136 432 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 CTTNQ14247 550 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 NAA25Q14CX7 972 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PRR16Q569H4 304 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PSMA8Q8TAA3 256 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 LRRN4Q8WUT4 740 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 RAVER2Q9HCJ3 691 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 FAM207AQ9NSI2 230 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 FBXO2Q9UK22 296 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 PCDHA6Q9UN73 950 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PCDHA8Q9Y5H6 950 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ERVV-1B6SEH8 477 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PIK3R2O00459 728 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 EPHB6O15197 1021 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 CASP14P31944 242 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PTPAQ15257 358 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 FBXO33Q7Z6M2 555 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 LARGE2Q8N3Y3 721 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 SMC1BQ8NDV3 1235 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 NEK11Q8NG66 645 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ZNF274Q96GC6 653 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 TRPC5Q9UL62 973 aaPredicted RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 ZKSCAN5Q9Y2L8 839 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 MACROD2A1Z1Q3 448 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PRCPP42785 496 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 CKAP4Q07065 602 aaKnown RBP3.69□□□□□ -1.82
CHD9-213ENST00000564845 SYCP2LQ5T4T6 812 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 KCNG4Q8TDN1 519 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ATP2A3Q93084 1043 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 PRIMPOLQ96LW4 560 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ABCF3Q9NUQ8 709 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 SAMM50Q9Y512 469 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 ACTN1P12814 892 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 KRT2P35908 639 aa3.69□□□□□ -1.82
CHD9-213ENST00000564845 IQCB1Q15051 598 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms