RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 TULP2O00295 520 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 APAF1O14727 1248 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 PDPK1O15530 556 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 FARP2O94887 1054 aaPredicted RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 SNRPB2P08579 225 aaKnown RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 MCCP23508 829 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 TPM4P67936 248 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 TUBB4BP68371 445 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 CBX1P83916 185 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 BMS1Q14692 1282 aaKnown RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 OLFML2BQ68BL8 750 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 IQCEQ6IPM2 695 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 CHD1LQ86WJ1 897 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 SIRT2Q8IXJ6 389 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 TXLNBQ8N3L3 684 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 COPS5Q92905 334 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 ZNF622Q969S3 477 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD9-210ENST00000564582 SHISA4Q96DD7 197 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 PLCD4Q9BRC7 762 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 TACO1Q9BSH4 297 aaKnown RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 CCDC113Q9H0I3 377 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 NSUN3Q9H649 340 aaKnown RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 DCP1AQ9NPI6 582 aaPredicted RBP6.56□□□□□ -1.36
CHD9-210ENST00000564582 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
CHD9-210ENST00000564582 SYNJ2O15056 1496 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 OR14I1A6ND48 311 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 CCDC85CA6NKD9 419 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 MPOP05164 745 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 KCNJ6P48051 423 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 ANAPC15P60006 121 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 TMEM62Q0P6H9 643 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 IFRD2Q12894 506 aaPredicted RBP6.55□□□□□ -1.36
CHD9-210ENST00000564582 RASGRF1Q13972 1273 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 TERF2Q15554 542 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 ADGRF1Q5T601 910 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 OGFOD2Q6N063 350 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 PRR23BQ6ZRT6 265 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 LRP10Q7Z4F1 713 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 UBXN4Q92575 508 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 LGR4Q9BXB1 951 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 ARGLU1Q9NWB6 273 aaPredicted RBP6.55□□□□□ -1.36
CHD9-210ENST00000564582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD9-210ENST00000564582 NSD2O96028 1365 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 WDR62O43379 1518 aa6.55□□□□□ -1.36
CHD9-210ENST00000564582 FANCD2Q9BXW9 1451 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 PDS5BQ9NTI5 1447 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 ABLIM1O14639 778 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 CCP110O43303 1012 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 NPHS1O60500 1241 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 SCG5P05408 212 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 THBDP07204 575 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 PLS3P13797 630 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 MMP14P50281 582 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 PPP2R2AP63151 447 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 MUM1L1Q5H9M0 696 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 CCDC183Q5T5S1 534 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 E4F1Q66K89 784 aaPredicted RBP6.54□□□□□ -1.36
CHD9-210ENST00000564582 ATF7IPQ6VMQ6 1270 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 CABP7Q86V35 215 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 POU5F2Q8N7G0 328 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
CHD9-210ENST00000564582 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 MNS1Q8NEH6 495 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 ZNF397Q8NF99 534 aaPredicted RBP6.54□□□□□ -1.36
CHD9-210ENST00000564582 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 KIAA1524Q8TCG1 905 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 PANK1Q8TE04 598 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 FAM84AQ96KN4 292 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 SLC26A8Q96RN1 970 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 MMP19Q99542 508 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 GPRC5CQ9NQ84 441 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 PDLIM7Q9NR12 457 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
CHD9-210ENST00000564582 SBNO2Q9Y2G9 1366 aa6.54□□□□□ -1.36
CHD9-210ENST00000564582 MYOM2P54296 1465 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 ELP1O95163 1332 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 CCDC171Q6TFL3 1326 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
CHD9-210ENST00000564582 A0A1W2PQU0 124 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 TBX1O43435 398 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 ECI1P42126 302 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 KCNJ4P48050 445 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 CEBPAP49715 358 aaPredicted RBP6.53□□□□□ -1.36
CHD9-210ENST00000564582 GALK1P51570 392 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 KCNAB2Q13303 367 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 SERINC3Q13530 473 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 PKN1Q16512 942 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 KCTD13Q8WZ19 329 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 MKL1Q969V6 931 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 AARSD1Q9BTE6 412 aaKnown RBP6.53□□□□□ -1.36
CHD9-210ENST00000564582 FAM107BQ9H098 131 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 ZBTB40Q9NUA8 1239 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 CTNNA3Q9UI47 895 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms