RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
KARS-204ENST00000564578 CYFIP1Q7L576 1253 aa14.14□□□□□ -0.15
KARS-204ENST00000564578 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
KARS-204ENST00000564578 TNS4Q8IZW8 715 aa14.14□□□□□ -0.15
KARS-204ENST00000564578 EMID1Q96A84 441 aaPredicted RBP14.14□□□□□ -0.15
KARS-204ENST00000564578 UPF3AQ9H1J1 476 aaKnown RBP14.14□□□□□ -0.15
KARS-204ENST00000564578 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
KARS-204ENST00000564578 MCM7P33993 719 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 CCSAPQ6IQ19 270 aaPredicted RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 METTL7BQ6UX53 244 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 DHX37Q8IY37 1157 aaKnown RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 C4orf32Q8N8J7 132 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 ZNF577Q9BSK1 485 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 TMEM60Q9H2L4 133 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 ZSCAN16Q9H4T2 348 aaPredicted RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 A6NJR5 290 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 F13A1P00488 732 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 GH1P01241 217 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 NEDD9Q14511 834 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 KLHDC9Q8NEP7 349 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 MTMR9Q96QG7 549 aa14.13□□□□□ -0.15
KARS-204ENST00000564578 NAP1L4Q99733 375 aaKnown RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.13□□□□□ -0.15
KARS-204ENST00000564578 NFASCO94856 1347 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 NEMFO60524 1076 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 PSMD10O75832 226 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
KARS-204ENST00000564578 BEX3Q00994 111 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 LAMC2Q13753 1193 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 LRRC41Q15345 812 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 OR6J1Q8NGC5 347 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 AFG1LQ8WV93 481 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 IPO9Q96P70 1041 aaKnown RBP14.12□□□□□ -0.15
KARS-204ENST00000564578 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 FTOQ9C0B1 505 aaKnown RBP eCLIP14.12□□□□□ -0.15
KARS-204ENST00000564578 NOL7Q9UMY1 257 aaKnown RBP14.12□□□□□ -0.15
KARS-204ENST00000564578 DOCK5Q9H7D0 1870 aa14.12□□□□□ -0.15
KARS-204ENST00000564578 TBX3O15119 743 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 CCNE2O96020 404 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 CST5P28325 142 aaPredicted RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 GIMAP8Q8ND71 665 aaPredicted RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 PPTC7Q8NI37 304 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 RIT2Q99578 217 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 TBC1D22BQ9NU19 505 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 TFRCP02786 760 aaKnown RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 EN2P19622 333 aaPredicted RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 PTGDRQ13258 359 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 ORC2Q13416 577 aaPredicted RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 FSCN1Q16658 493 aaKnown RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 GNASQ5JWF2 1037 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 FAM20AQ96MK3 541 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 GPR20Q99678 358 aa14.11□□□□□ -0.15
KARS-204ENST00000564578 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
KARS-204ENST00000564578 MMP3P08254 477 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 HOXD8P13378 290 aaPredicted RBP14.1□□□□□ -0.15
KARS-204ENST00000564578 SP4Q02446 784 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 SPIRE1Q08AE8 756 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 KCNA10Q16322 511 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 CALCRLQ16602 461 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 RNF180Q86T96 592 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 SDF4Q9BRK5 362 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 SLC9A2Q9UBY0 812 aa14.1□□□□□ -0.15
KARS-204ENST00000564578 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 DDX39AO00148 427 aaKnown RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 HOMEZQ8IX15 550 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 ARRDC4Q8NCT1 418 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 VAV3Q9UKW4 847 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 CLIC4Q9Y696 253 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 DNM1LO00429 736 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 GAS7O60861 476 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 PPFIA4O75335 1185 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 ATG7O95352 703 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 CPT1AP50416 773 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 ACTR2P61160 394 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 SF3A1Q15459 793 aaKnown RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 IL17AQ16552 155 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 FOXD4L6Q3SYB3 417 aaPredicted RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
KARS-204ENST00000564578 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
KARS-204ENST00000564578 CCDC85CA6NKD9 419 aa14.08□□□□□ -0.16
KARS-204ENST00000564578 ASGR1P07306 291 aa14.08□□□□□ -0.16
KARS-204ENST00000564578 TXKP42681 527 aa14.08□□□□□ -0.16
KARS-204ENST00000564578 ACLYP53396 1101 aa14.08□□□□□ -0.16
KARS-204ENST00000564578 ATP2C1P98194 919 aaPredicted RBP14.08□□□□□ -0.16
KARS-204ENST00000564578 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
KARS-204ENST00000564578 PTPAQ15257 358 aa14.08□□□□□ -0.16
KARS-204ENST00000564578 UBE2Q1Q7Z7E8 422 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms