RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RCAN1P53805 252 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 IKBKEQ14164 716 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 CYFIP1Q7L576 1253 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
SPG7-210ENST00000564409 GPR20Q99678 358 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
SPG7-210ENST00000564409 SPDYE3A6NKU9 549 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 hCG_1984214I3L0E3 225 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 NBNO60934 754 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 CA3P07451 260 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 MYOGP15173 224 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 IGFBP4P22692 258 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 ADGRE1Q14246 886 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 GPNMBQ14956 572 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 ZNF618Q5T7W0 954 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 APOA5Q6Q788 366 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 ZNF713Q8N859 430 aaPredicted RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 ATXN2LQ8WWM7 1075 aaKnown RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 ATP6V0A1Q93050 837 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
SPG7-210ENST00000564409 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
SPG7-210ENST00000564409 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 TLL1O43897 1013 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 RXRAP19793 462 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 PPP1R18Q6NYC8 613 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 CMTR1Q8N1G2 835 aaKnown RBP17.22■□□□□ 0.35
SPG7-210ENST00000564409 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 PRUNE2Q8WUY3 3088 aa17.22■□□□□ 0.35
SPG7-210ENST00000564409 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 ZBTB43O43298 467 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
SPG7-210ENST00000564409 SORBS3O60504 671 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 LGR5O75473 907 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 FOSP01100 380 aaPredicted RBP17.21■□□□□ 0.35
SPG7-210ENST00000564409 RSPH10BP0C881 870 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 THPOP40225 353 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 ZNF200P98182 395 aaPredicted RBP17.21■□□□□ 0.35
SPG7-210ENST00000564409 TJAP1Q5JTD0 557 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 ZBED2Q9BTP6 218 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 RNPEPQ9H4A4 650 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 UBIAD1Q9Y5Z9 338 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 MICAL3Q7RTP6 2002 aa17.21■□□□□ 0.35
SPG7-210ENST00000564409 TAP1Q03518 808 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 MTMR1Q13613 665 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
SPG7-210ENST00000564409 HIC1Q14526 733 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 RTN1Q16799 776 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 RAD9AQ99638 391 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 THEGQ9P2T0 379 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
SPG7-210ENST00000564409 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
SPG7-210ENST00000564409 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 GJB5O95377 273 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 KCNA2P16389 499 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 ITGB5P18084 799 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 SEPT1Q8WYJ6 367 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 WNT8BQ93098 351 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 RIC8AQ9NPQ8 531 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
SPG7-210ENST00000564409 TREHO43280 583 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
SPG7-210ENST00000564409 ADAM17P78536 824 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 MRPS5P82675 430 aaKnown RBP17.18■□□□□ 0.34
SPG7-210ENST00000564409 FUT2Q10981 343 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 PLEKHG4Q58EX7 1191 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 RPAINQ86UA6 219 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 SEPT8Q92599 483 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 KCNB2Q92953 911 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
SPG7-210ENST00000564409 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 ERAP1Q9NZ08 941 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
SPG7-210ENST00000564409 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 AMHP03971 560 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 TCF7P36402 384 aaPredicted RBP17.17■□□□□ 0.34
SPG7-210ENST00000564409 ADCY7P51828 1080 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 NAPAP54920 295 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 DEFB103AP81534 67 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 FGD1P98174 961 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 CCDC85BQ15834 202 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms