RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 EMSYQ7Z589 1322 aa16.96■□□□□ 0.3
SNX29-203ENST00000564111 NFASCO94856 1347 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 LGALS2P05162 132 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 ZNF286BP0CG31 522 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 CCL23P55773 120 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 SLC9A7Q96T83 725 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 GPR20Q99678 358 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 ALG1Q9BT22 464 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 SH3GLB2Q9NR46 395 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 DOCK5Q9H7D0 1870 aa16.95■□□□□ 0.3
SNX29-203ENST00000564111 C17orf102A2RUQ5 167 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 IQCF3P0C7M6 154 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 UBE2SQ16763 222 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
SNX29-203ENST00000564111 PHOSPHO2Q8TCD6 241 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 SDF4Q9BRK5 362 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 ANO3Q9BYT9 981 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 SLC4A7Q9Y6M7 1214 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 H3BRB1 525 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 IFNAR1P17181 557 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 SREBF1P36956 1147 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 CHMP4BP1P59074 171 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 LRRC8DQ7L1W4 858 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
SNX29-203ENST00000564111 C16orf70Q9BSU1 422 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 TUT1Q9H6E5 874 aaKnown RBP16.94■□□□□ 0.3
SNX29-203ENST00000564111 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
SNX29-203ENST00000564111 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
SNX29-203ENST00000564111 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 SP2Q02086 613 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 FAM43BQ6ZT52 329 aaPredicted RBP16.93■□□□□ 0.3
SNX29-203ENST00000564111 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 TIFAQ96CG3 184 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 CDKL5O76039 1030 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 ACRP10323 421 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 KCNA2P16389 499 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 DNAJB2P25686 324 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 CDC27P30260 824 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 HOXC8P31273 242 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 SETQ01105 290 aaPredicted RBP16.93■□□□□ 0.3
SNX29-203ENST00000564111 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
SNX29-203ENST00000564111 SEPT1Q8WYJ6 367 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
SNX29-203ENST00000564111 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
SNX29-203ENST00000564111 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 CNKSR3Q6P9H4 555 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 ZMYND12Q9H0C1 365 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 KAT6AQ92794 2004 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 GBF1Q92538 1859 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 SERINC5Q86VE9 423 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 REXO1Q8N1G1 1221 aaKnown RBP16.92■□□□□ 0.3
SNX29-203ENST00000564111 FTOQ9C0B1 505 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNX29-203ENST00000564111 SMARCAD1Q9H4L7 1026 aa16.92■□□□□ 0.3
SNX29-203ENST00000564111 CXCL10P02778 98 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 CYP3A4P08684 503 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 SMIM10L2AP0DMW4 78 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 SMIM10L2BP0DMW5 78 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 ZNF76P36508 570 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 Q7L0L9 218 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 SCLYQ96I15 445 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 JPH1Q9HDC5 661 aaPredicted RBP16.91■□□□□ 0.3
SNX29-203ENST00000564111 ERAP1Q9NZ08 941 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 NRCAMQ92823 1304 aa16.91■□□□□ 0.3
SNX29-203ENST00000564111 ZBBXA8MT70 800 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 CPLX1O14810 134 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 CKBP12277 381 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 ITGB5P18084 799 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 PDIA3P30101 505 aaKnown RBP16.9■□□□□ 0.3
SNX29-203ENST00000564111 ADD1P35611 737 aaKnown RBP16.9■□□□□ 0.3
SNX29-203ENST00000564111 KCNJ6P48051 423 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 GALNT17Q6IS24 598 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 TRIP12Q14669 1992 aaPredicted RBP16.9■□□□□ 0.3
SNX29-203ENST00000564111 SLC26A2P50443 739 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
SNX29-203ENST00000564111 RSPH3Q86UC2 560 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 SLC17A8Q8NDX2 589 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 ATP6V0A1Q93050 837 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 PDRG1Q9NUG6 133 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 SLC9A2Q9UBY0 812 aa16.9■□□□□ 0.3
SNX29-203ENST00000564111 ABHD14A-ACY1A0A1B0GW23 586 aa16.89■□□□□ 0.29
SNX29-203ENST00000564111 KIF28PB7ZC32 967 aa16.89■□□□□ 0.29
SNX29-203ENST00000564111 CPA1P15085 419 aa16.89■□□□□ 0.29
SNX29-203ENST00000564111 ATP2A2P16615 1042 aaKnown RBP16.89■□□□□ 0.29
SNX29-203ENST00000564111 TRIM71Q2Q1W2 868 aaKnown RBP16.89■□□□□ 0.29
SNX29-203ENST00000564111 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
SNX29-203ENST00000564111 OTOP2Q7RTS6 562 aa16.89■□□□□ 0.29
SNX29-203ENST00000564111 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms