RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 ADSSL1Q8N142 457 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-209ENST00000564068 MROH2AA6NES4 1674 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 GNPATO15228 680 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 LRRN2O75325 713 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 IFNB1P01574 187 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■□□□ 13.1
COMMD4-209ENST00000564068 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
COMMD4-209ENST00000564068 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 VWDEQ8N2E2 1590 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 CLIC2O15247 247 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 ACSL3O95573 720 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 SNX1Q13596 522 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 SAAL1Q96ER3 474 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 DYNLL2Q96FJ2 89 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 TXNDC9O14530 226 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 DR1Q01658 176 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 LRRC14Q15048 493 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 SLC40A1Q9NP59 571 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 LAD1O00515 517 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 SRGNP10124 158 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 BCRP11274 1271 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 BMP6P22004 513 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 POLE2P56282 527 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 STK4Q13043 487 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 CYP4F22Q6NT55 531 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 BZW2Q9Y6E2 419 aaKnown RBP13.73□□□□□ -0.21
COMMD4-209ENST00000564068 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
COMMD4-209ENST00000564068 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 KIF1CO43896 1103 aaKnown RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 HLFQ16534 295 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 FBXO41Q8TF61 875 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 AGXT2Q9BYV1 514 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CCDC87Q9NVE4 849 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 POC1B-GALNT4F8VUJ3 575 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 KCNQ4P56696 695 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 PDIA6Q15084 440 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 TPH2Q8IWU9 490 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 COA7Q96BR5 231 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CAPN6Q9Y6Q1 641 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 SART1O43290 800 aaKnown RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 BAG2O95816 211 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 ABL1P00519 1130 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 ZNF211Q13398 564 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 USH1GQ495M9 461 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 PRR16Q569H4 304 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 GOLPH3Q9H4A6 298 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CIB2O75838 187 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 CYP2D6P10635 497 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 PLCG2P16885 1265 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 EIF3BP55884 814 aaKnown RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-209ENST00000564068 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 EMILIN3Q9NT22 766 aa13.72□□□□□ -0.21
COMMD4-209ENST00000564068 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 POTEMA6NI47 508 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 ENO4A6NNW6 628 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 PTGISQ16647 500 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-209ENST00000564068 MARCH10Q8NA82 808 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-209ENST00000564068 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms