RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 VCANP13611 3396 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 NOP56O00567 594 aaKnown RBP19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 SORBS3O60504 671 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 EFCAB14O75071 495 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 RXRAP19793 462 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 MBTPS1Q14703 1052 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 CYFIP1Q7L576 1253 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 NLRX1Q86UT6 975 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 CMTR1Q8N1G2 835 aaKnown RBP19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 GIMAP8Q8ND71 665 aaPredicted RBP19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 GPRASP2Q96D09 838 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 NEK1Q96PY6 1258 aa19.81■□□□□ 0.76
VPS9D1-203ENST00000563798 EMSYQ7Z589 1322 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 C17orf102A2RUQ5 167 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 SMIM10L2AP0DMW4 78 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 SMIM10L2BP0DMW5 78 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 KCNJ6P48051 423 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 TAP1Q03518 808 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 TJAP1Q5JTD0 557 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 APOA5Q6Q788 366 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 ATXN2LQ8WWM7 1075 aaKnown RBP19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 CDHR1Q96JP9 859 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 LRRC2Q9BYS8 371 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 RNPEPQ9H4A4 650 aa19.8■□□□□ 0.76
VPS9D1-203ENST00000563798 MYO9BQ13459 2157 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 CAND2O75155 1236 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 IGFBP4P22692 258 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 ADAM17P78536 824 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 MKRN4PQ13434 485 aaPredicted RBP19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 TCTN1Q2MV58 587 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 ATP6V0A1Q93050 837 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 RBM28Q9NW13 759 aaKnown RBP19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 UBIAD1Q9Y5Z9 338 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 TRANK1O15050 2925 aa19.79■□□□□ 0.76
VPS9D1-203ENST00000563798 MAFGO15525 162 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 LGR5O75473 907 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 ITGB5P18084 799 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 FUT2Q10981 343 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 IKBKEQ14164 716 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 SKAP1Q86WV1 359 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 MICU3Q86XE3 530 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 PRDM6Q9NQX0 595 aa19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 SPTBN5Q9NRC6 3674 aaKnown RBP19.78■□□□□ 0.76
VPS9D1-203ENST00000563798 PTPRSQ13332 1948 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 RSPH10B2B2RC85 870 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 TREHO43280 583 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 TLL1O43897 1013 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 CDC45O75419 566 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 ARHGEF15O94989 841 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 GJB5O95377 273 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 RSPH10BP0C881 870 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 GNAT1P11488 350 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 KCNA2P16389 499 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 RCAN1P53805 252 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 KRT32Q14532 448 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 THEGQ9P2T0 379 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 ZNF215Q9UL58 517 aaPredicted RBP19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 TELO2Q9Y4R8 837 aa19.77■□□□□ 0.76
VPS9D1-203ENST00000563798 CNTNAP5Q8WYK1 1306 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 hCG_1642624A0A1W2PR95 340 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 ATP9AO75110 1047 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 THPOP40225 353 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 DEFB103AP81534 67 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 PLEKHG4Q58EX7 1191 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 PPP1R18Q6NYC8 613 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 RAB11FIP4Q86YS3 637 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 CCDC82Q8N4S0 544 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 PPM1EQ8WY54 764 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 KCNB2Q92953 911 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 RAD9AQ99638 391 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 JADE2Q9NQC1 790 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 BRPF3Q9ULD4 1205 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 PCDHA6Q9UN73 950 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 PCDHA8Q9Y5H6 950 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 MTCH2Q9Y6C9 303 aa19.76■□□□□ 0.75
VPS9D1-203ENST00000563798 EPOPA6NHQ4 379 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 SPDYE3A6NKU9 549 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 hCG_1984214I3L0E3 225 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 HMGB1P09429 215 aaKnown RBP19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 UBE2SQ16763 222 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 ADCK5Q3MIX3 580 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 FAM26DQ5JW98 314 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 HEATR3Q7Z4Q2 680 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 RPAINQ86UA6 219 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 TRIM50Q86XT4 487 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 ZNF713Q8N859 430 aaPredicted RBP19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 DBF4BQ8NFT6 615 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 ASB2Q96Q27 587 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 SETD4Q9NVD3 440 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 NRCAMQ92823 1304 aa19.75■□□□□ 0.75
VPS9D1-203ENST00000563798 ZBTB43O43298 467 aa19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 MTMR1Q13613 665 aa19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 CCDC85BQ15834 202 aaPredicted RBP19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 RTN1Q16799 776 aa19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 WWC2Q6AWC2 1192 aa19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 SEPT1Q8WYJ6 367 aa19.74■□□□□ 0.75
VPS9D1-203ENST00000563798 RIC8AQ9NPQ8 531 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms