RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF165P49910 485 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 HSD17B4P51659 736 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 SNAP25P60880 206 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 TPM4P67936 248 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 FKBP1BP68106 108 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-202ENST00000563366 CCDC173Q0VFZ6 552 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBFD1-202ENST00000563366 PTPRNQ16849 979 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 Q4G0T1 1027 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 SPECC1Q5M775 1068 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 FAM160A2Q8N612 972 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-202ENST00000563366 PDILTQ8N807 584 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 MB21D1Q8N884 522 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 SMARCE1Q969G3 411 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 DHX58Q96C10 678 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 EPSTI1Q96J88 318 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 BPIFA3Q9BQP9 254 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
UBFD1-202ENST00000563366 TMEM60Q9H2L4 133 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
UBFD1-202ENST00000563366 ZNF536O15090 1300 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 SMCHD1A6NHR9 2005 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 GOLGA6L19H0YKK7 550 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 OPLAHO14841 1288 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 ZNF76P36508 570 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 NLRP12P59046 1061 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 AMPD3Q01432 767 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 PPIL2Q13356 520 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 PRKG1Q13976 671 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-202ENST00000563366 NT5DC1Q5TFE4 455 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 RRAGBQ5VZM2 374 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 KRT79Q5XKE5 535 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 CABP7Q86V35 215 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 ERMNQ8TAM6 284 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 CDK5RAP3Q96JB5 506 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 GSDMAQ96QA5 445 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 LRRC27Q9C0I9 530 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 NT5C3AQ9H0P0 336 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-202ENST00000563366 RMND1Q9NWS8 449 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 STK17AQ9UEE5 414 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 LRWD1Q9UFC0 647 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 PCDHA12Q9UN75 941 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 ADAMTS5Q9UNA0 930 aa10.91□□□□□ -0.66
UBFD1-202ENST00000563366 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 BECN2A8MW95 431 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 SLC37A4O43826 429 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 DXOO77932 396 aaKnown RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 ALAS1P13196 640 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 TECP42680 631 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 TXKP42681 527 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 IRF5Q13568 498 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 IL17AQ16552 155 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 TJAP1Q5JTD0 557 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 HAUS3Q68CZ6 603 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 FASTKD5Q7L8L6 764 aaKnown RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 CPXCR1Q8N123 301 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 CCDC47Q96A33 483 aaKnown RBP10.9□□□□□ -0.66
UBFD1-202ENST00000563366 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 KCNMB3Q9NPA1 279 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
UBFD1-202ENST00000563366 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 CTHP32929 405 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 COPB2P35606 906 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 PNOCQ13519 176 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 FCHSD1Q86WN1 690 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 SPATA20Q8TB22 786 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 AGBL1Q96MI9 1066 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 ELP3Q9H9T3 547 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 RAVER2Q9HCJ3 691 aaKnown RBP10.89□□□□□ -0.67
UBFD1-202ENST00000563366 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 FZD1Q9UP38 647 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 UTRNP46939 3433 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
UBFD1-202ENST00000563366 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 POTECB2RU33 542 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 GPR37L1O60883 481 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 F12P00748 615 aaPredicted RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms