RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 IQCKQ8N0W5 287 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
CNN2-205ENST00000562958 ZIM3Q96PE6 472 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 LSM14BQ9BX40 385 aaKnown RBP16.03■□□□□ 0.16
CNN2-205ENST00000562958 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.03■□□□□ 0.16
CNN2-205ENST00000562958 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 POTEMA6NI47 508 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 NCK2O43639 380 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 NOL4O94818 638 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
CNN2-205ENST00000562958 CXCR5P32302 372 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 TTMPQ5BVD1 217 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 GAKO14976 1311 aa16.03■□□□□ 0.16
CNN2-205ENST00000562958 BUB1O43683 1085 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 PALMO75781 387 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
CNN2-205ENST00000562958 MRPL12P52815 198 aaKnown RBP16.02■□□□□ 0.16
CNN2-205ENST00000562958 ASIC2Q16515 512 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 CDC37Q16543 378 aaPredicted RBP16.02■□□□□ 0.16
CNN2-205ENST00000562958 MICALCLQ6ZW33 695 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 PACS2Q86VP3 889 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 TAF4BQ92750 862 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 CUL5Q93034 780 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 PBKQ96KB5 322 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
CNN2-205ENST00000562958 DDX25Q9UHL0 483 aaKnown RBP16.02■□□□□ 0.16
CNN2-205ENST00000562958 FAM169AQ9Y6X4 670 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
CNN2-205ENST00000562958 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.15
CNN2-205ENST00000562958 KCNQ2O43526 872 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 TLR2O60603 784 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 IL1R1P14778 569 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 ICE2Q659A1 982 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.15
CNN2-205ENST00000562958 MTMR4Q9NYA4 1195 aa16.02■□□□□ 0.15
CNN2-205ENST00000562958 ERLIN2O94905 339 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 ATP2B4P23634 1241 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 EPS15P42566 896 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
CNN2-205ENST00000562958 KLHL30Q0D2K2 578 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 CUL1Q13616 776 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CNN2-205ENST00000562958 CALR3Q96L12 384 aaKnown RBP16.01■□□□□ 0.15
CNN2-205ENST00000562958 CCDC43Q96MW1 224 aaKnown RBP16.01■□□□□ 0.15
CNN2-205ENST00000562958 EPB41L5Q9HCM4 733 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 NLRC4Q9NPP4 1024 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
CNN2-205ENST00000562958 CETN3O15182 167 aa16■□□□□ 0.15
CNN2-205ENST00000562958 MARCH6O60337 910 aa16■□□□□ 0.15
CNN2-205ENST00000562958 GLI1P08151 1106 aa16■□□□□ 0.15
CNN2-205ENST00000562958 MYBP10242 640 aa16■□□□□ 0.15
CNN2-205ENST00000562958 USP8P40818 1118 aa16■□□□□ 0.15
CNN2-205ENST00000562958 TNNI2P48788 182 aa16■□□□□ 0.15
CNN2-205ENST00000562958 GUCY2DQ02846 1103 aa16■□□□□ 0.15
CNN2-205ENST00000562958 ARFGAP2Q8N6H7 521 aa16■□□□□ 0.15
CNN2-205ENST00000562958 ANKRD13CQ8N6S4 541 aa16■□□□□ 0.15
CNN2-205ENST00000562958 TBC1D5Q92609 795 aa16■□□□□ 0.15
CNN2-205ENST00000562958 ARL8AQ96BM9 186 aa16■□□□□ 0.15
CNN2-205ENST00000562958 PSMB7Q99436 277 aa16■□□□□ 0.15
CNN2-205ENST00000562958 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
CNN2-205ENST00000562958 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
CNN2-205ENST00000562958 GGA2Q9UJY4 613 aa16■□□□□ 0.15
CNN2-205ENST00000562958 TMEM59LQ9UK28 342 aa16■□□□□ 0.15
CNN2-205ENST00000562958 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
CNN2-205ENST00000562958 IGKV6D-41A0A0C4DH26 115 aa16■□□□□ 0.15
CNN2-205ENST00000562958 FRMD3A2A2Y4 597 aa16■□□□□ 0.15
CNN2-205ENST00000562958 EDIL3O43854 480 aa16■□□□□ 0.15
CNN2-205ENST00000562958 KLRC1P26715 233 aa16■□□□□ 0.15
CNN2-205ENST00000562958 HSPA9P38646 679 aaKnown RBP16■□□□□ 0.15
CNN2-205ENST00000562958 RHBDL3P58872 404 aa16■□□□□ 0.15
CNN2-205ENST00000562958 LRRC41Q15345 812 aa16■□□□□ 0.15
CNN2-205ENST00000562958 KIAA0753Q2KHM9 967 aa16■□□□□ 0.15
CNN2-205ENST00000562958 GPATCH4Q5T3I0 446 aaKnown RBP16■□□□□ 0.15
CNN2-205ENST00000562958 KCNK18Q7Z418 384 aa16■□□□□ 0.15
CNN2-205ENST00000562958 USP38Q8NB14 1042 aa16■□□□□ 0.15
CNN2-205ENST00000562958 GANQ9H2C0 597 aa16■□□□□ 0.15
CNN2-205ENST00000562958 CD209Q9NNX6 404 aa16■□□□□ 0.15
CNN2-205ENST00000562958 EHD2Q9NZN4 543 aa16■□□□□ 0.15
CNN2-205ENST00000562958 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CNN2-205ENST00000562958 NFU1Q9UMS0 254 aa16■□□□□ 0.15
CNN2-205ENST00000562958 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
CNN2-205ENST00000562958 PCDHA2Q9Y5H9 948 aa16■□□□□ 0.15
CNN2-205ENST00000562958 CARSP49589 748 aaKnown RBP15.99■□□□□ 0.15
CNN2-205ENST00000562958 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
CNN2-205ENST00000562958 GRIK5Q16478 980 aa15.99■□□□□ 0.15
CNN2-205ENST00000562958 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
CNN2-205ENST00000562958 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
CNN2-205ENST00000562958 YTHDF3Q7Z739 585 aaKnown RBP15.99■□□□□ 0.15
CNN2-205ENST00000562958 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms