RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 BEGAINQ9BUH8 593 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 NT5C3AQ9H0P0 336 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 RIOX1Q9H6W3 641 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 ANKZF1Q9H8Y5 726 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 EVA1BQ9NVM1 165 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 STX8Q9UNK0 236 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 JRKLQ9Y4A0 524 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 FAM205AQ6ZU69 1335 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 KDM3AQ9Y4C1 1321 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 LCA5LO95447 670 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 TCP1P17987 556 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 CASP1P29466 404 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 AARSP49588 968 aaKnown RBP eCLIP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 ADCY7P51828 1080 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 VAV2P52735 878 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 MRPL12P52815 198 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 USP14P54578 494 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 SH3BP2P78314 561 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 ST5P78524 1137 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 CALCRLQ16602 461 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 LETM2Q2VYF4 491 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 VWA3BQ502W6 1294 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 GLE1Q53GS7 698 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 ZNF572Q7Z3I7 529 aaPredicted RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 STAMQ92783 540 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 RPGRQ92834 1020 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 SECISBP2LQ93073 1101 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 CNOT6LQ96LI5 555 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 CEP63Q96MT8 703 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 DUSP9Q99956 384 aaKnown RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 TTYH3Q9C0H2 523 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 TMEM60Q9H2L4 133 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 NHEJ1Q9H9Q4 299 aaPredicted RBP8.31□□□□□ -1.08
CFDP1-202ENST00000562602 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 LRWD1Q9UFC0 647 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 GUCA1BQ9UMX6 200 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 PLAGL2Q9UPG8 496 aa8.31□□□□□ -1.08
CFDP1-202ENST00000562602 FLT1P17948 1338 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 B4DLN1 442 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 POLR3GO15318 223 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 KCNQ2O43526 872 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 CYTH3O43739 400 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 RPS6KA5O75582 802 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 SASH3O75995 380 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 SEC31AO94979 1220 aaKnown RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 ANXA13P27216 316 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 BTDP43251 543 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 NOM1Q5C9Z4 860 aaKnown RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 C10orf76Q5T2E6 689 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 GPATCH4Q5T3I0 446 aaKnown RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 MMGT1Q8N4V1 131 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 CAGE1Q8TC20 777 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 TBCKQ8TEA7 893 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 LARP4BQ92615 738 aaKnown RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 DYNLL2Q96FJ2 89 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 MTMR9Q96QG7 549 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 RTFDC1Q9BY42 306 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 CD209Q9NNX6 404 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 ABCB6Q9NP58 842 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 ADAM21Q9UKJ8 722 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 FAM184BQ9ULE4 1060 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 MYH14Q7Z406 1995 aaKnown RBP8.3□□□□□ -1.08
CFDP1-202ENST00000562602 KAT6BQ8WYB5 2073 aa8.3□□□□□ -1.08
CFDP1-202ENST00000562602 GAKO14976 1311 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 USP17L3A6NCW0 530 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 USP17L4A6NCW7 530 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 PJA2O43164 708 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 MARCH6O60337 910 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 SNRPBP14678 240 aaKnown RBP8.29□□□□□ -1.08
CFDP1-202ENST00000562602 KLRK1P26718 216 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 ACTN2P35609 894 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 TECP42680 631 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 FKBP3Q00688 224 aaKnown RBP8.29□□□□□ -1.08
CFDP1-202ENST00000562602 TRAF1Q13077 416 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CASP8Q14790 479 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 PTPRNQ16849 979 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 CRY2Q49AN0 593 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 WDR59Q6PJI9 974 aa8.29□□□□□ -1.08
CFDP1-202ENST00000562602 MOXD1Q6UVY6 613 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms