RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 NEMP1O14524 444 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 MPOP05164 745 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 GLI1P08151 1106 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 KRT15P19012 456 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
CNOT1-203ENST00000562046 SCNN1BP51168 640 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 ANAPC15P60006 121 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 YBX1P67809 324 aaKnown RBP6.29□□□□□ -1.4
CNOT1-203ENST00000562046 NR1I3Q14994 352 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 CHRNA2Q15822 529 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 ADGRF1Q5T601 910 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 RPTNQ6XPR3 784 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 STAG1Q8WVM7 1258 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 PEX11GQ96HA9 241 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 BOCQ9BWV1 1114 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 SLC6A17Q9H1V8 727 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.29□□□□□ -1.4
CNOT1-203ENST00000562046 ASH2LQ9UBL3 628 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 HCFC2Q9Y5Z7 792 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 PHLDB1Q86UU1 1377 aa6.29□□□□□ -1.4
CNOT1-203ENST00000562046 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 SLC12A8A0AV02 714 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 F8W031 263 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-203ENST00000562046 DVL2O14641 736 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 KCNK3O14649 394 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 SLC27A2O14975 620 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 PPM1GO15355 546 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-203ENST00000562046 ZEB2O60315 1214 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 ID4P47928 161 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 STAT4Q14765 748 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 SEC23AQ15436 765 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 FIGNQ5HY92 759 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 KCTD1Q719H9 257 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 ZSWIM9Q86XI8 627 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 IRF2BP1Q8IU81 584 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 RBM12BQ8IXT5 1001 aaKnown RBP6.28□□□□□ -1.4
CNOT1-203ENST00000562046 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 DLG3Q92796 817 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
CNOT1-203ENST00000562046 CARMIL2Q6F5E8 1435 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 ZNF503-AS2A6NEH8 195 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 BIN1O00499 593 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 GPR39O43194 453 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 BRINP1O60477 761 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 MAFKO60675 156 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
CNOT1-203ENST00000562046 FKBP9O95302 570 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 LTFP02788 710 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 LSSP48449 732 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 MAPKAPK2P49137 400 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 EVA1CP58658 441 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 PRR5P85299 388 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 TUSC3Q13454 348 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 RAB3GAP1Q15042 981 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 FKBP9P1Q75LS8 142 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 NLGN4XQ8N0W4 816 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 Q8N3U1 123 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 ARRDC4Q8NCT1 418 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 CHTF18Q8WVB6 975 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 USP7Q93009 1102 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 TTC1Q99614 292 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 AP5M1Q9H0R1 490 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 SPTLC3Q9NUV7 552 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 OXSMQ9NWU1 459 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 THG1LQ9NWX6 298 aaKnown RBP6.27□□□□□ -1.41
CNOT1-203ENST00000562046 H2AFY2Q9P0M6 372 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-203ENST00000562046 NUDT5Q9UKK9 219 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 PCDHB4Q9Y5E5 795 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 B3GALT1Q9Y5Z6 326 aa6.27□□□□□ -1.41
CNOT1-203ENST00000562046 OR14I1A6ND48 311 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 FAM90A27PA6NNH2 459 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 GAS7O60861 476 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 ZBTB7AO95365 584 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 CPEP16870 476 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 PMLP29590 882 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 IRF9Q00978 393 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 SLC9A5Q14940 896 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 PLEKHN1Q494U1 663 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-203ENST00000562046 CPZQ66K79 652 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 MILR1Q7Z6M3 343 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-203ENST00000562046 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 ATL2Q8NHH9 583 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 ZNF552Q9H707 407 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-203ENST00000562046 EMC7Q9NPA0 242 aa6.26□□□□□ -1.41
CNOT1-203ENST00000562046 DDX56Q9NY93 547 aaKnown RBP6.26□□□□□ -1.41
CNOT1-203ENST00000562046 ACOT7O00154 380 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 HRKO00198 91 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 TGM5O43548 720 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 HSP90B1P14625 803 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms