RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CRTAMO95727 393 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 POU3F3P20264 500 aaPredicted RBP8.86□□□□□ -0.99
SMG1-204ENST00000561940 FOXO4P98177 505 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 SLC9A5Q14940 896 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 LCNL1Q6ZST4 164 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 MAMDC2Q7Z304 686 aaPredicted RBP8.86□□□□□ -0.99
SMG1-204ENST00000561940 RNF180Q86T96 592 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 PWWP2AQ96N64 755 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 KCNJ15Q99712 375 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 SYT3Q9BQG1 590 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 BRINP2Q9C0B6 783 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 MAGEC2Q9UBF1 373 aaPredicted RBP8.86□□□□□ -0.99
SMG1-204ENST00000561940 PCDHA9Q9Y5H5 950 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 EFCAB14O75071 495 aa8.85□□□□□ -0.99
SMG1-204ENST00000561940 IGFBP6P24592 240 aaPredicted RBP8.85□□□□□ -0.99
SMG1-204ENST00000561940 CNGA1P29973 690 aa8.85□□□□□ -0.99
SMG1-204ENST00000561940 LBX2Q6XYB7 198 aa8.85□□□□□ -0.99
SMG1-204ENST00000561940 RIOX2Q8IUF8 465 aa8.85□□□□□ -0.99
SMG1-204ENST00000561940 Q8N1Y9 231 aa8.85□□□□□ -0.99
SMG1-204ENST00000561940 ANAPC15P60006 121 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 RSPO2Q6UXX9 243 aaPredicted RBP8.84□□□□□ -0.99
SMG1-204ENST00000561940 IFNL3Q8IZI9 196 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 FAM26EQ8N5C1 309 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 CHAC2Q8WUX2 184 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 INTS7Q9NVH2 962 aaKnown RBP8.84□□□□□ -0.99
SMG1-204ENST00000561940 PCDHA8Q9Y5H6 950 aa8.84□□□□□ -0.99
SMG1-204ENST00000561940 TCRBV16S1A1N1A0A5B0 115 aa8.83□□□□□ -1
SMG1-204ENST00000561940 OPA1O60313 960 aa8.83□□□□□ -1
SMG1-204ENST00000561940 DGKIO75912 1065 aa8.83□□□□□ -1
SMG1-204ENST00000561940 COL6A2P12110 1019 aa8.83□□□□□ -1
SMG1-204ENST00000561940 AFF3P51826 1226 aaKnown RBP8.83□□□□□ -1
SMG1-204ENST00000561940 GPR85P60893 370 aa8.83□□□□□ -1
SMG1-204ENST00000561940 SMARCC2Q8TAQ2 1214 aa8.83□□□□□ -1
SMG1-204ENST00000561940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.83□□□□□ -1
SMG1-204ENST00000561940 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
SMG1-204ENST00000561940 DDX11Q96FC9 970 aa8.83□□□□□ -1
SMG1-204ENST00000561940 HGSO14964 777 aaPredicted RBP8.82□□□□□ -1
SMG1-204ENST00000561940 STAT5AP42229 794 aa8.82□□□□□ -1
SMG1-204ENST00000561940 SLC6A11P48066 632 aa8.82□□□□□ -1
SMG1-204ENST00000561940 PCBP1Q15365 356 aaKnown RBP eCLIP8.82□□□□□ -1
SMG1-204ENST00000561940 TCERG1LQ5VWI1 586 aa8.82□□□□□ -1
SMG1-204ENST00000561940 CD300LDQ6UXZ3 194 aa8.82□□□□□ -1
SMG1-204ENST00000561940 MTDHQ86UE4 582 aaKnown RBP8.82□□□□□ -1
SMG1-204ENST00000561940 STK32CQ86UX6 486 aa8.82□□□□□ -1
SMG1-204ENST00000561940 AMIGO3Q86WK7 504 aa8.82□□□□□ -1
SMG1-204ENST00000561940 RBM12BQ8IXT5 1001 aaKnown RBP8.82□□□□□ -1
SMG1-204ENST00000561940 PIP4K2CQ8TBX8 421 aa8.82□□□□□ -1
SMG1-204ENST00000561940 DDX1Q92499 740 aaKnown RBP8.82□□□□□ -1
SMG1-204ENST00000561940 RNF38Q9H0F5 515 aa8.82□□□□□ -1
SMG1-204ENST00000561940 TMX1Q9H3N1 280 aa8.82□□□□□ -1
SMG1-204ENST00000561940 EPB41L1Q9H4G0 881 aa8.82□□□□□ -1
SMG1-204ENST00000561940 CAAP1Q9H8G2 361 aa8.82□□□□□ -1
SMG1-204ENST00000561940 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
SMG1-204ENST00000561940 SOD2P04179 222 aa8.81□□□□□ -1
SMG1-204ENST00000561940 ASLP04424 464 aa8.81□□□□□ -1
SMG1-204ENST00000561940 GRK2P25098 689 aa8.81□□□□□ -1
SMG1-204ENST00000561940 GRK3P35626 688 aa8.81□□□□□ -1
SMG1-204ENST00000561940 GUCY1A3Q02108 690 aa8.81□□□□□ -1
SMG1-204ENST00000561940 CACNB2Q08289 660 aaPredicted RBP8.81□□□□□ -1
SMG1-204ENST00000561940 PKN3Q6P5Z2 889 aa8.81□□□□□ -1
SMG1-204ENST00000561940 ABHD17CQ6PCB6 329 aa8.81□□□□□ -1
SMG1-204ENST00000561940 ETV3LQ6ZN32 361 aa8.81□□□□□ -1
SMG1-204ENST00000561940 ADGRG2Q8IZP9 1017 aa8.81□□□□□ -1
SMG1-204ENST00000561940 ARRDC4Q8NCT1 418 aa8.81□□□□□ -1
SMG1-204ENST00000561940 MAGEB10Q96LZ2 347 aaPredicted RBP8.81□□□□□ -1
SMG1-204ENST00000561940 NOX5Q96PH1 765 aa8.81□□□□□ -1
SMG1-204ENST00000561940 IPPKQ9H8X2 491 aa8.81□□□□□ -1
SMG1-204ENST00000561940 AQP7O14520 342 aa8.8□□□□□ -1
SMG1-204ENST00000561940 KPNA6O60684 536 aa8.8□□□□□ -1
SMG1-204ENST00000561940 JMJD7P0C870 316 aa8.8□□□□□ -1
SMG1-204ENST00000561940 IGFALSP35858 605 aa8.8□□□□□ -1
SMG1-204ENST00000561940 CDKN1CP49918 316 aaPredicted RBP8.8□□□□□ -1
SMG1-204ENST00000561940 EVA1CP58658 441 aa8.8□□□□□ -1
SMG1-204ENST00000561940 RBM10P98175 930 aaKnown RBP8.8□□□□□ -1
SMG1-204ENST00000561940 SEPT7Q16181 437 aaKnown RBP8.8□□□□□ -1
SMG1-204ENST00000561940 KIZQ2M2Z5 673 aa8.8□□□□□ -1
SMG1-204ENST00000561940 STRA8Q7Z7C7 330 aa8.8□□□□□ -1
SMG1-204ENST00000561940 B3GNT8Q7Z7M8 397 aa8.8□□□□□ -1
SMG1-204ENST00000561940 YIPF4Q9BSR8 244 aa8.8□□□□□ -1
SMG1-204ENST00000561940 MTFR1LQ9H019 292 aa8.8□□□□□ -1
SMG1-204ENST00000561940 MAPRE3Q9UPY8 281 aa8.8□□□□□ -1
SMG1-204ENST00000561940 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
SMG1-204ENST00000561940 PMF1-BGLAPU3KQ54 211 aa8.8□□□□□ -1
SMG1-204ENST00000561940 SLC27A2O14975 620 aa8.79□□□□□ -1
SMG1-204ENST00000561940 RAB11FIP3O75154 756 aa8.79□□□□□ -1
SMG1-204ENST00000561940 TADA3O75528 432 aa8.79□□□□□ -1
SMG1-204ENST00000561940 C8BP07358 591 aa8.79□□□□□ -1
SMG1-204ENST00000561940 KCNA6P17658 529 aa8.79□□□□□ -1
SMG1-204ENST00000561940 BMP7P18075 431 aa8.79□□□□□ -1
SMG1-204ENST00000561940 SOX5P35711 763 aa8.79□□□□□ -1
SMG1-204ENST00000561940 NEK4P51957 841 aa8.79□□□□□ -1
SMG1-204ENST00000561940 CT47A1Q5JQC4 288 aaPredicted RBP8.79□□□□□ -1
SMG1-204ENST00000561940 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.79□□□□□ -1
SMG1-204ENST00000561940 LEO1Q8WVC0 666 aaPredicted RBP8.79□□□□□ -1
SMG1-204ENST00000561940 STAG1Q8WVM7 1258 aa8.79□□□□□ -1
SMG1-204ENST00000561940 ZFYVE21Q9BQ24 234 aa8.79□□□□□ -1
SMG1-204ENST00000561940 ALG1Q9BT22 464 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms