RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 MCF2L2Q86YR7 1114 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 TBC1D10CQ8IV04 446 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
COMMD4-204ENST00000561662 C16orf70Q9BSU1 422 aa21.26■□□□□ 0.99
COMMD4-204ENST00000561662 A0A0D9SFI3 127 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 SMIM10L2AP0DMW4 78 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 SMIM10L2BP0DMW5 78 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 HOXD8P13378 290 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-204ENST00000561662 MX1P20591 662 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 SP2Q02086 613 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 CTC1Q2NKJ3 1217 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 CELF3Q5SZQ8 465 aaKnown RBP21.25■□□□□ 0.99
COMMD4-204ENST00000561662 GPATCH4Q5T3I0 446 aaKnown RBP21.25■□□□□ 0.99
COMMD4-204ENST00000561662 CENPQQ7L2Z9 268 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-204ENST00000561662 FIBCD1Q8N539 461 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 TTC14Q96N46 770 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 BCAS3Q9H6U6 928 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 NEDD4P46934 1319 aa21.25■□□□□ 0.99
COMMD4-204ENST00000561662 STXBP3O00186 592 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 PPFIA4O75335 1185 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 MFSD6Q6ZSS7 791 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 IL31RAQ8NI17 732 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 PBXIP1Q96AQ6 731 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 IL17RAQ96F46 866 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 POP1Q99575 1024 aaKnown RBP21.24■□□□□ 0.99
COMMD4-204ENST00000561662 FAM86C1Q9NVL1 165 aa21.24■□□□□ 0.99
COMMD4-204ENST00000561662 MRPL11Q9Y3B7 192 aaKnown RBP21.24■□□□□ 0.99
COMMD4-204ENST00000561662 UBA1P22314 1058 aaKnown RBP21.23■□□□□ 0.99
COMMD4-204ENST00000561662 ZNF589Q86UQ0 364 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-204ENST00000561662 EDAQ92838 391 aa21.23■□□□□ 0.99
COMMD4-204ENST00000561662 RNPEPQ9H4A4 650 aa21.23■□□□□ 0.99
COMMD4-204ENST00000561662 TMEM221A6NGB7 291 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 M0R296 226 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 OPLAHO14841 1288 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 HSPD1P10809 573 aaKnown RBP21.22■□□□□ 0.99
COMMD4-204ENST00000561662 HOXA13P31271 388 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-204ENST00000561662 BMPR1AP36894 532 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 SMAD4Q13485 552 aaKnown RBP21.22■□□□□ 0.99
COMMD4-204ENST00000561662 PNMA1Q8ND90 353 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 PDCD2LQ9BRP1 358 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 JMJD4Q9H9V9 463 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 ALG13Q9NP73 1137 aaKnown RBP21.22■□□□□ 0.99
COMMD4-204ENST00000561662 HELLSQ9NRZ9 838 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 SETD4Q9NVD3 440 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 CD207Q9UJ71 328 aa21.22■□□□□ 0.99
COMMD4-204ENST00000561662 H3BRB1 525 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 NCK2O43639 380 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 LINC00271P0C7V0 271 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 PTPN5P54829 565 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 TRIM67Q6ZTA4 783 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 C11orf84Q9BUA3 381 aaPredicted RBP21.21■□□□□ 0.99
COMMD4-204ENST00000561662 TUT1Q9H6E5 874 aaKnown RBP21.21■□□□□ 0.99
COMMD4-204ENST00000561662 MLXIPQ9HAP2 919 aa21.21■□□□□ 0.99
COMMD4-204ENST00000561662 LGALS2P05162 132 aa21.2■□□□□ 0.98
COMMD4-204ENST00000561662 NDUFV1P49821 464 aa21.2■□□□□ 0.98
COMMD4-204ENST00000561662 TCF15Q12870 199 aa21.2■□□□□ 0.98
COMMD4-204ENST00000561662 TRIM50Q86XT4 487 aa21.2■□□□□ 0.98
COMMD4-204ENST00000561662 RALGAPA2Q2PPJ7 1873 aa21.2■□□□□ 0.98
COMMD4-204ENST00000561662 C5orf67F2Z3F1 127 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 ST18O60284 1047 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 HOXC8P31273 242 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 HSD17B4P51659 736 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 NMIQ13287 307 aaPredicted RBP21.19■□□□□ 0.98
COMMD4-204ENST00000561662 PGM5Q15124 567 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 EVI5LQ96CN4 794 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 KAT14Q9H8E8 782 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 TELO2Q9Y4R8 837 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 ADGRA3Q8IWK6 1321 aa21.19■□□□□ 0.98
COMMD4-204ENST00000561662 COL4A6Q14031 1691 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 MYH6P13533 1939 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 GHRP10912 638 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 ADGRD2Q7Z7M1 963 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 SUGP1Q8IWZ8 645 aaKnown RBP21.18■□□□□ 0.98
COMMD4-204ENST00000561662 ESR2Q92731 530 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 ZDBF2Q9HCK1 2354 aa21.18■□□□□ 0.98
COMMD4-204ENST00000561662 PPP1R11O60927 126 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-204ENST00000561662 KDM4AO75164 1064 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 RB1P06400 928 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 ARHGAP4P98171 946 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 ADAM15Q13444 863 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 CAMK1Q14012 370 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 BTG3Q14201 252 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-204ENST00000561662 VSIG10LQ86VR7 867 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 STAG2Q8N3U4 1231 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 APBB2Q92870 758 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 MAF1Q9H063 256 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 LMAN2LQ9H0V9 348 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 CCDC171Q6TFL3 1326 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 SALL3Q9BXA9 1300 aa21.17■□□□□ 0.98
COMMD4-204ENST00000561662 TRIM6-TRIM34B2RNG4 842 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
COMMD4-204ENST00000561662 GFRA3O60609 400 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 CHRNA1P02708 482 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 PARP1P09874 1014 aaKnown RBP21.16■□□□□ 0.98
COMMD4-204ENST00000561662 DNAJB1P25685 340 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 VCPP55072 806 aaKnown RBP21.16■□□□□ 0.98
COMMD4-204ENST00000561662 ZXDAP98168 799 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 SP4Q02446 784 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms