RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CUL1Q13616 776 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 GRAMD1BQ3KR37 738 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ST13P4Q8IZP2 240 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 AZI2Q9H6S1 392 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 GCNT4Q9P109 453 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 SH2B2O14492 632 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 MAPK13O15264 365 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 C6orf118Q5T5N4 469 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 RESP18Q5W5W9 173 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 NOP9Q86U38 636 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 YY1AP1Q9H869 796 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 FIS1Q9Y3D6 152 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 hCG_2014768A0A024R1R8 64 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 MT-ND3P03897 115 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ECE1P42892 770 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 NFRKBQ6P4R8 1299 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 PI16Q6UXB8 463 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 WDR24Q96S15 920 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 PITPNM3Q9BZ71 974 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 A0A0G2JND7 137 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 CFLARO15519 480 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 RANBP1P43487 201 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 DEPTORQ8TB45 409 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 PUS7LQ9H0K6 701 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 GCC2Q8IWJ2 1684 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 ABCC10Q5T3U5 1492 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 GMNCA6NCL1 334 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 DKC1O60832 514 aaKnown RBP eCLIP11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 NCF2P19878 526 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CUL4BQ13620 913 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 XKR9Q5GH70 373 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ARHGEF25Q86VW2 580 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ABL1P00519 1130 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CA4P22748 312 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ESRRGP62508 458 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ADCY2Q08462 1091 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 KLC4Q9NSK0 619 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 GPC4O75487 556 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ODR4Q5SWX8 454 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 GALNT17Q6IS24 598 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 RAPH1Q70E73 1250 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 LCA5Q86VQ0 697 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 NME8Q8N427 588 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 HDAC11Q96DB2 347 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 KDM5CP41229 1560 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 SYNJ2BP-COX16A0A087WUM0 186 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 PRKAB2O43741 272 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 TTC4O95801 387 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 PLCG1P19174 1290 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CCNE1P24864 410 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 MFAP3P55082 362 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 GUCY1A3Q02108 690 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ZBTB17Q13105 803 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 FAM186BQ8IYM0 893 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 PCIF1Q9H4Z3 704 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 MEIS1O00470 390 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CREB3O43889 395 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 GARSP41250 739 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 YARSP54577 528 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 KRT80Q6KB66 452 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CFAP36Q96G28 342 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 OSBPL1AQ9BXW6 950 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 COPRSQ9NQ92 184 aa11.04□□□□□ -0.64
GTF3C1-202ENST00000561623 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 MCUQ8NE86 351 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 KRT1P04264 644 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 VSNL1P62760 191 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 BASP1P80723 227 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 LMNB2Q03252 620 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-202ENST00000561623 PSMC2P35998 433 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms