RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	SLC37A4	O43826	429 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	FLOT1	O75955	427 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	TDP2	O95551	362 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	FOS	P01100	380 aa	Predicted RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	ICAM1	P05362	532 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CYP2B6	P20813	491 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CCND3	P30281	292 aa	Predicted RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	HMGCS2	P54868	508 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	PABPC4	Q13310	644 aa	Known RBP eCLIP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CALCRL	Q16602	461 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	STX1A	Q16623	288 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	LONRF3	Q496Y0	759 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	DTHD1	Q6ZMT9	781 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	RNF214	Q8ND24	703 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CNNM3	Q8NE01	707 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CRYGN	Q8WXF5	182 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	EPSTI1	Q96J88	318 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	P2RX7	Q99572	595 aa	Known RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	NAP1L4	Q99733	375 aa	Known RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	PYM1	Q9BRP8	204 aa	Known RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	PANK2	Q9BZ23	570 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	SLC38A10	Q9HBR0	1119 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	KIAA1468	Q9P260	1216 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	PRKAG2	Q9UGJ0	569 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	USP25	Q9UHP3	1055 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	PPP1R9A	Q9ULJ8	1098 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	MRPL11	Q9Y3B7	192 aa	Known RBP	8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	ZNF536	O15090	1300 aa		8.49	□□□□□ -1.05
TPM1-231	ENST00000561395	CYP3A7-CYP3A51P	A0A087WV96	503 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SPDYE3	A6NKU9	549 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	CAVIN2	O95810	425 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	FDX1	P10109	184 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	CYP3A7	P24462	503 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SREBF1	P36956	1147 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	TXLNA	P40222	546 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	GCLC	P48506	637 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	USP11	P51784	963 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	ATN1	P54259	1190 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	CACNB2	Q08289	660 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	E2F4	Q16254	413 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	ANO6	Q4KMQ2	910 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SH3D19	Q5HYK7	790 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	LHX8	Q68G74	356 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	MOXD1	Q6UVY6	613 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	PDILT	Q8N807	584 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	PROCA1	Q8NCQ7	364 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	FAM200A	Q8TCP9	573 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	ADAMTS19	Q8TE59	1207 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SOCS4	Q8WXH5	440 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	ERCC4	Q92889	916 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	AK8	Q96MA6	479 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	MBOAT7	Q96N66	472 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	MTMR9	Q96QG7	549 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SENP6	Q9GZR1	1112 aa	Predicted RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	TMOD4	Q9NZQ9	345 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	DDX25	Q9UHL0	483 aa	Known RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SERTAD1	Q9UHV2	236 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	HOOK1	Q9UJC3	728 aa	Known RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	TUBE1	Q9UJT0	475 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	CCPG1	Q9ULG6	757 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	ZNFX1	Q9P2E3	1918 aa	Known RBP	8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	SYNGAP1	Q96PV0	1343 aa		8.48	□□□□□ -1.05
TPM1-231	ENST00000561395	PIEZO1	Q92508	2521 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	MUC6	Q6W4X9	2439 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	GCOM1	H8Y6P7	765 aa	Predicted RBP	8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	VWA5A	O00534	786 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	ZBED4	O75132	1171 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	SLFN14	P0C7P3	912 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	POLR2M	P0CAP2	368 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	HOXA13	P31271	388 aa	Predicted RBP	8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	RTP1	P59025	263 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	ARHGAP4	P98171	946 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	GHRHR	Q02643	423 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	PNOC	Q13519	176 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	POSTN	Q15063	836 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	TMEM266	Q2M3C6	531 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	UVSSA	Q2YD98	709 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	KANK3	Q6NY19	840 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	IGSF22	Q8N9C0	903 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	DHX58	Q96C10	678 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	ATG4C	Q96DT6	458 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	CCDC34	Q96HJ3	373 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	AGBL1	Q96MI9	1066 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	NUDT12	Q9BQG2	462 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	DNAJC25	Q9H1X3	360 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	ANO10	Q9NW15	660 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	PNMA2	Q9UL42	364 aa		8.47	□□□□□ -1.05
TPM1-231	ENST00000561395	LRRC37A2	A6NM11	1700 aa		8.46	□□□□□ -1.05
TPM1-231	ENST00000561395		A0A087WWV3	80 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	PP2D1	A8MPX8	630 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	GALR2	O43603	387 aa	Predicted RBP	8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	CFB	P00751	764 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	CYP3A4	P08684	503 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	XRCC5	P13010	732 aa	Known RBP	8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	CIITA	P33076	1130 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	HSD17B4	P51659	736 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	OAZ1	P54368	228 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	NLRP12	P59046	1061 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	GRIN2C	Q14957	1233 aa		8.46	□□□□□ -1.06
TPM1-231	ENST00000561395	ZRSR1	Q15695	479 aa	Known RBP	8.46	□□□□□ -1.06

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