RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 C6orf15Q6UXA7 325 aaPredicted RBP6.73□□□□□ -1.33
WHAMM-202ENST00000560964 TRIM48Q8IWZ4 208 aa6.73□□□□□ -1.33
WHAMM-202ENST00000560964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
WHAMM-202ENST00000560964 ZCCHC14Q8WYQ9 949 aaKnown RBP6.73□□□□□ -1.33
WHAMM-202ENST00000560964 ACTR10Q9NZ32 417 aa6.73□□□□□ -1.33
WHAMM-202ENST00000560964 FBXL7Q9UJT9 491 aa6.73□□□□□ -1.33
WHAMM-202ENST00000560964 TCAF1Q9Y4C2 921 aa6.73□□□□□ -1.33
WHAMM-202ENST00000560964 KRIT1O00522 736 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 SUSD5O60279 629 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 ACVRL1P37023 503 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 SELENOPP49908 381 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 GFRA1P56159 465 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
WHAMM-202ENST00000560964 VPS11Q9H270 941 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 CCSER2Q9H7U1 834 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 ZDHHC9Q9Y397 364 aa6.72□□□□□ -1.33
WHAMM-202ENST00000560964 B4GALT4O60513 344 aa6.71□□□□□ -1.34
WHAMM-202ENST00000560964 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
WHAMM-202ENST00000560964 PRSS53Q2L4Q9 553 aa6.71□□□□□ -1.34
WHAMM-202ENST00000560964 LARP1BQ659C4 914 aaKnown RBP6.71□□□□□ -1.34
WHAMM-202ENST00000560964 MRIQ9BWK5 157 aa6.71□□□□□ -1.34
WHAMM-202ENST00000560964 ACBD3Q9H3P7 528 aa6.71□□□□□ -1.34
WHAMM-202ENST00000560964 PATE3B3GLJ2 98 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 SMAD7O15105 426 aaKnown RBP6.7□□□□□ -1.34
WHAMM-202ENST00000560964 CHGBP05060 677 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 LCP1P13796 627 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 SF1Q15637 639 aaKnown RBP6.7□□□□□ -1.34
WHAMM-202ENST00000560964 ZNF585AQ6P3V2 769 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 TMC5Q6UXY8 1006 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 VPS37DQ86XT2 251 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 Q8N1X5 172 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 TMEM145Q8NBT3 493 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 TTLL11Q8NHH1 800 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 ASH2LQ9UBL3 628 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 ADAM29Q9UKF5 820 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 NPFFR2Q9Y5X5 522 aa6.7□□□□□ -1.34
WHAMM-202ENST00000560964 E9PSI1 815 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 AGRPO00253 132 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 MUSKO15146 869 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 EIF5BO60841 1220 aaKnown RBP6.69□□□□□ -1.34
WHAMM-202ENST00000560964 ZNF623O75123 536 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 DDAH1O94760 285 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
WHAMM-202ENST00000560964 FXNQ16595 210 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 VASNQ6EMK4 673 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
WHAMM-202ENST00000560964 EPN3Q9H201 632 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 CAPN10Q9HC96 672 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 SLC6A20Q9NP91 592 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 DLL4Q9NR61 685 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 TESMINQ9Y4I5 508 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
WHAMM-202ENST00000560964 SLPIP03973 132 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 HS1BP3Q53T59 392 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 SLC35F1Q5T1Q4 408 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 DENND5AQ6IQ26 1287 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 PALM2Q8IXS6 379 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 C1orf159Q96HA4 380 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 SEC61A2Q9H9S3 476 aa6.68□□□□□ -1.34
WHAMM-202ENST00000560964 AMHP03971 560 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 MAP4K2Q12851 820 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 SMAD2Q15796 467 aaKnown RBP6.67□□□□□ -1.34
WHAMM-202ENST00000560964 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 RALYLQ86SE5 291 aaKnown RBP6.67□□□□□ -1.34
WHAMM-202ENST00000560964 ZFPM1Q8IX07 1006 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 DTX3Q8N9I9 347 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 KCTD13Q8WZ19 329 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 GPR27Q9NS67 375 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 PRKAG3Q9UGI9 489 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 WASF3Q9UPY6 502 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 MRVI1Q9Y6F6 885 aa6.67□□□□□ -1.34
WHAMM-202ENST00000560964 B2RBV5 119 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 FBXO21O94952 628 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 COL6A1P12109 1028 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 R3HDM1Q15032 1099 aaKnown RBP6.66□□□□□ -1.34
WHAMM-202ENST00000560964 Q6ZUG5 572 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 WWC2-AS2Q96NR7 200 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 PTPN18Q99952 460 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 MEGF9Q9H1U4 602 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
WHAMM-202ENST00000560964 KLHL18O94889 574 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 CAPNS1P04632 268 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 RSPO2Q6UXX9 243 aaPredicted RBP6.65□□□□□ -1.34
WHAMM-202ENST00000560964 PROSER1Q86XN7 944 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 IFNL2Q8IZJ0 200 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 PIP4K2CQ8TBX8 421 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 Q8TCH9 128 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 SLITRK6Q9H5Y7 841 aa6.65□□□□□ -1.34
WHAMM-202ENST00000560964 SLC27A2O14975 620 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
WHAMM-202ENST00000560964 AJUBAQ96IF1 538 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 MENTQ9BUN1 341 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 PDGFDQ9GZP0 370 aaPredicted RBP6.64□□□□□ -1.35
WHAMM-202ENST00000560964 RBPJLQ9UBG7 517 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 SLC4A7Q9Y6M7 1214 aa6.64□□□□□ -1.35
WHAMM-202ENST00000560964 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms