RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 GPSM2P81274 684 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CEP57Q86XR8 500 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ARHGAP24Q8N264 748 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ATP2A3Q93084 1043 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 RNF14Q9UBS8 474 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SERPINA10Q9UK55 444 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PCDHA6Q9UN73 950 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PCDHA8Q9Y5H6 950 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 MED7O43513 233 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 KRT31Q15323 416 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PROM2Q8N271 834 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SPZ1Q9BXG8 430 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 GSG1L2A8MUP6 293 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CLIC2O15247 247 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ECE2O60344 883 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 IGSF3O75054 1194 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 MFAP3LO75121 409 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CCNA1P78396 465 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 C2orf54Q08AI8 447 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 DALRD3Q5D0E6 543 aaKnown RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 GKAP1Q5VSY0 366 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CAPS2Q9BXY5 557 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 HNRNPDLO14979 420 aaKnown RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CDC27P30260 824 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 JAK3P52333 1124 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 GNGT1P63211 74 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PDZD4Q76G19 769 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 FAM133AQ8N9E0 248 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PLEKHA4Q9H4M7 779 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CD209Q9NNX6 404 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SUGT1Q9Y2Z0 365 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 NDUFA10O95299 355 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ZNF131P52739 623 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 EPHB4P54760 987 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 CACNB1Q02641 598 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 EHHADHQ08426 723 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 PPFIBP2Q8ND30 876 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 DPH5Q9H2P9 285 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 DCP1AQ9NPI6 582 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 BARHL2Q9NY43 387 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 A0A087WWV3 80 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
AP4E1-203ENST00000560508 GMNNO75496 209 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 DDIT3P35638 169 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 KCTD2Q14681 263 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SURF1Q15526 300 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 FAM182BQ5T319 152 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ARMC9Q7Z3E5 817 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 ACRBPQ8NEB7 543 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 NWD1Q149M9 1564 aa7.54□□□□□ -1.2
AP4E1-203ENST00000560508 NBPF26B4DH59 902 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 MAPK4P31152 587 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 PRELPP51888 382 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 NBPF10Q6P3W6 841 aaKnown RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SCYL2Q6P3W7 929 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SGMS1Q86VZ5 419 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 NBPF15Q8N660 670 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 KIF2CQ99661 725 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SUGCTQ9HAC7 445 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 ST7Q9NRC1 585 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 HESX1Q9UBX0 185 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 JRKLQ9Y4A0 524 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SHPRHQ149N8 1683 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 ABCB11O95342 1321 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 RAD17O75943 681 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 TROVE2P10155 538 aaKnown RBP eCLIP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 STX2P32856 288 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 GUCY2DQ02846 1103 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 MGARPQ8TDB4 240 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 CEP170P1Q96L14 293 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 NDST4Q9H3R1 872 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 UBE2TQ9NPD8 197 aaPredicted RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 EIF4A3P38919 411 aaKnown RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 GABPAQ06546 454 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 BFSP1Q12934 665 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 MESDQ14696 234 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 GEN1Q17RS7 908 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 ARHGEF1Q92888 912 aaKnown RBP7.53□□□□□ -1.2
AP4E1-203ENST00000560508 ZNF653Q96CK0 615 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 CABS1Q96KC9 395 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 NACA2Q9H009 215 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 HOMER3Q9NSC5 361 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 CEMIPQ8WUJ3 1361 aa7.53□□□□□ -1.2
AP4E1-203ENST00000560508 RNF40O75150 1001 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms