RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 ATN1P54259 1190 aaPredicted RBP17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 LETM2Q2VYF4 491 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 HSDL1Q3SXM5 330 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 METTL7BQ6UX53 244 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 NIPA1Q7RTP0 329 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 NEK8Q86SG6 692 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 SENP7Q9BQF6 1050 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 MAFGO15525 162 aa17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 ZEB2O60315 1214 aa17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 PURAQ00577 322 aaKnown RBP17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 SETQ01105 290 aaPredicted RBP17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 PPTC7Q8NI37 304 aa17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 INTS4Q96HW7 963 aaKnown RBP17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 STARD7Q9NQZ5 370 aa17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 TNRC18O15417 2968 aaPredicted RBP17.62■□□□□ 0.41
LYSMD2-204ENST00000560491 DDX39AO00148 427 aaKnown RBP17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 WNT7AO00755 349 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 LRRC26Q2I0M4 334 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 LARP1BQ659C4 914 aaKnown RBP17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 GLT1D1Q96MS3 346 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 ZNF577Q9BSK1 485 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 FOXP1Q9H334 677 aaPredicted RBP17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 POLR3EQ9NVU0 708 aa17.61■□□□□ 0.41
LYSMD2-204ENST00000560491 SCN10AQ9Y5Y9 1956 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 CYP3A7-CYP3A51PA0A087WV96 503 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 H3BQV1 296 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 MSH4O15457 936 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 SLC37A4O43826 429 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 CCNT1O60563 726 aaKnown RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 ZNF286BP0CG31 522 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 CYP3A7P24462 503 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 PSMC6P62333 389 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 GNL2Q13823 731 aaKnown RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 DGKDQ16760 1214 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 Q4G0T1 1027 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 SLC39A5Q6ZMH5 540 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 GIMAP8Q8ND71 665 aaPredicted RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 GJA10Q969M2 543 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 VTI1AQ96AJ9 217 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 MBOAT7Q96N66 472 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 GPR20Q99678 358 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 SDF4Q9BRK5 362 aa17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 MTG1Q9BT17 334 aaPredicted RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 JPH1Q9HDC5 661 aaPredicted RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 DDX25Q9UHL0 483 aaKnown RBP17.6■□□□□ 0.41
LYSMD2-204ENST00000560491 NFASCO94856 1347 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 MLLT1Q03111 559 aaPredicted RBP17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 MOXD1Q6UVY6 613 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 NOSTRINQ8IVI9 506 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 SLC9A2Q9UBY0 812 aa17.59■□□□□ 0.41
LYSMD2-204ENST00000560491 GRIN2DO15399 1336 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 ELP1O95163 1332 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 RTP1P59025 263 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 SNX17Q15036 470 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 KAT2BQ92831 832 aa17.58■□□□□ 0.4
LYSMD2-204ENST00000560491 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 VPS37CA5D8V6 355 aaPredicted RBP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 KPNA6O60684 536 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 CABYRO75952 493 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 CCNE2O96020 404 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 LGALS2P05162 132 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 TRIM60Q495X7 471 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 TRIM50Q86XT4 487 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 DPF3Q92784 378 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 SLC5A5Q92911 643 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 C16orf70Q9BSU1 422 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 ATP11BQ9Y2G3 1177 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 WDR81Q562E7 1941 aa17.57■□□□□ 0.4
LYSMD2-204ENST00000560491 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 F2P00734 622 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 TCF7P36402 384 aaPredicted RBP17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 ACTR2P61160 394 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 NBR1Q14596 966 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 C7orf61Q8IZ16 206 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 NAP1L4Q99733 375 aaKnown RBP17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 TBC1D22BQ9NU19 505 aa17.56■□□□□ 0.4
LYSMD2-204ENST00000560491 ARVCFO00192 962 aa17.55■□□□□ 0.4
LYSMD2-204ENST00000560491 PQBP1O60828 265 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms