RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CPA1P15085 419 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 PCSK2P16519 638 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
CLPX-206ENST00000560166 Q6ZUG5 572 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 CDC37L1Q7L3B6 337 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 USP48Q86UV5 1035 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 FAM83AQ86UY5 434 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 MAPKAPK5Q8IW41 473 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 IGDCC4Q8TDY8 1250 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 BRF1Q92994 677 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 GTF3C6Q969F1 213 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 CCDC17Q96LX7 622 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 MXD3Q9BW11 206 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 CHMP5Q9NZZ3 219 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 ZSWIM5Q9P217 1185 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 PI4KBQ9UBF8 816 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 SERPINB13Q9UIV8 391 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 TPCN1Q9ULQ1 816 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 KIF3AQ9Y496 699 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 SCN9AQ15858 1988 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 CCDC196A0A1B0GTZ2 297 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 A6NHS1 94 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 FAM155AB1AL88 458 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 SORBS3O60504 671 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 CALM1P0DP23 149 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 CALM2P0DP24 149 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 CALM3P0DP25 149 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 PDCP20941 246 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 NOVP48745 357 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 GMPSP49915 693 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 RBM5P52756 815 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLPX-206ENST00000560166 NUCB2P80303 420 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 HMGN5P82970 282 aaKnown RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 DAB2P98082 770 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 TNFAIP1Q13829 316 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 SEC23AQ15436 765 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 ME3Q16798 604 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 TMEM67Q5HYA8 995 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 LDLRAD1Q5T700 205 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 CYB5R4Q7L1T6 521 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 DGKHQ86XP1 1220 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 FOXP4Q8IVH2 680 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 C2orf69Q8N8R5 385 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 TTC16Q8NEE8 873 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 MAP3K14Q99558 947 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 SLKQ9H2G2 1235 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 LY9Q9HBG7 655 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 GBA2Q9HCG7 927 aaPredicted RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 HERC5Q9UII4 1024 aaKnown RBP7.22□□□□□ -1.25
CLPX-206ENST00000560166 SYNPO2Q9UMS6 1093 aa7.22□□□□□ -1.25
CLPX-206ENST00000560166 MYO5AQ9Y4I1 1855 aaKnown RBP7.21□□□□□ -1.25
CLPX-206ENST00000560166 H7C1D1 291 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 IFIT3O14879 490 aaKnown RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 RANBP6O60518 1105 aaKnown RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 CDKL5O76039 1030 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 DDAH1O94760 285 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 MICAL2O94851 1124 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 TBC1D8O95759 1140 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 CYP2D6P10635 497 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 PDIA3P30101 505 aaKnown RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 TNNI2P48788 182 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 CDK8P49336 464 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 PLCD1P51178 756 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 ORC1Q13415 861 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 WTAPQ15007 396 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 ALG1LQ6GMV1 187 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 CPLX2Q6PUV4 134 aaKnown RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 APOA5Q6Q788 366 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 SHISA2Q6UWI4 295 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 SYNE3Q6ZMZ3 975 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 ZNF444Q8N0Y2 327 aaPredicted RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 SMARCC2Q8TAQ2 1214 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 FAM151AQ8WW52 585 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 PRMT6Q96LA8 375 aaPredicted RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 CSRNP1Q96S65 589 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 MYOZ2Q9NPC6 264 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 DDX4Q9NQI0 724 aaKnown RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 TOMM22Q9NS69 142 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 GINM1Q9NU53 330 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 ZNF70Q9UC06 446 aaPredicted RBP7.21□□□□□ -1.26
CLPX-206ENST00000560166 SLC12A7Q9Y666 1083 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 TACC3Q9Y6A5 838 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 TNKSO95271 1327 aa7.21□□□□□ -1.26
CLPX-206ENST00000560166 LAMB1P07942 1786 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 CYP2D7A0A087X1C5 515 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 KLF18A0A0U1RQI7 1052 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 CCDC69A6NI79 296 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 TSPY2A6NKD2 308 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 GOLGA8BA8MQT2 603 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
CLPX-206ENST00000560166 WNT10BO00744 389 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms