RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 NFE2Q16621 373 aaPredicted RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 TEX35Q5T0J7 233 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 DCAF15Q66K64 600 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 CEP85Q6P2H3 762 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 STRA8Q7Z7C7 330 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 RAVER1Q8IY67 606 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 MSL3Q8N5Y2 521 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 RELTQ969Z4 430 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 RCC1LQ96I51 464 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 MRGPRX3Q96LB0 322 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 TMPRSS13Q9BYE2 586 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 UBXN6Q9BZV1 441 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 DDX19AQ9NUU7 478 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 WHRNQ9P202 907 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 FEZ2Q9UHY8 353 aaPredicted RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 ZNF451Q9Y4E5 1061 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 CACNA1FO60840 1977 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 UGGT1Q9NYU2 1555 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 SETD1AO15047 1707 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 FAM83GA6ND36 823 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 AP5Z1O43299 807 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 STX6O43752 255 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 EFCAB14O75071 495 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 DNAJC8O75937 253 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 SLU7O95391 586 aaKnown RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 TPM1P09493 284 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 C6orf222P0C671 652 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 CD247P20963 164 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 HSPA4P34932 840 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 ZNF75DP51815 510 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 GABREP78334 506 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 TTLL4Q14679 1199 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 DUOXA2Q1HG44 320 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 NBPF12Q5TAG4 269 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 PRAMEF13Q5VWM6 474 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 C7orf61Q8IZ16 206 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 C17orf53Q8N3J3 647 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 CRACR2BQ8N4Y2 399 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 DTWD1Q8N5C7 304 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 SLC7A14Q8TBB6 771 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 TP53INP1Q96A56 240 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 ZSCAN31Q96LW9 406 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 TTC14Q96N46 770 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 DPH2Q9BQC3 489 aaPredicted RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
TPM1-222ENST00000560131 TRIM39Q9HCM9 518 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 AKT3Q9Y243 479 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 A0A1W2PP64 1363 aa6.04□□□□□ -1.44
TPM1-222ENST00000560131 CAMSAP1Q5T5Y3 1602 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 TTC21BQ7Z4L5 1316 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 NRKQ7Z2Y5 1582 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 YTHDC2Q9H6S0 1430 aaKnown RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 A0A087WZG4 1122 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 KIF3BO15066 747 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 PEX14O75381 377 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 DEAF1O75398 565 aaPredicted RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 ZRANB2O95218 330 aaKnown RBP eCLIP6.03□□□□□ -1.44
TPM1-222ENST00000560131 RASGRP1O95267 797 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 ASLP04424 464 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 PTGS1P23219 599 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 CHMLP26374 656 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 GPS2Q13227 327 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 MBTPS1Q14703 1052 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 DHCR24Q15392 516 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 TWISTNBQ3B726 338 aaPredicted RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 RNF219Q5W0B1 726 aaPredicted RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 CCDC186Q7Z3E2 898 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 NECAB2Q7Z6G3 386 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 TXNRD3Q86VQ6 643 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 ARHGEF39Q8N4T4 335 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 GSTCDQ8NEC7 633 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 WDR66Q8TBY9 1149 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 ZNF512BQ96KM6 892 aaPredicted RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 TM6SF1Q9BZW5 370 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 MKRN2Q9H000 416 aaKnown RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 CYP4F12Q9HCS2 524 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 PCMTD2Q9NV79 361 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 CWC15Q9P013 229 aaKnown RBP6.03□□□□□ -1.44
TPM1-222ENST00000560131 NDOR1Q9UHB4 597 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 CEP131Q9UPN4 1083 aa6.03□□□□□ -1.44
TPM1-222ENST00000560131 ATP7BP35670 1465 aa6.02□□□□□ -1.44
TPM1-222ENST00000560131 TTC21AQ8NDW8 1320 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 RIMS2Q9UQ26 1411 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 CCP110O43303 1012 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 TBX1O43435 398 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 TSPAN6O43657 245 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 DLX3O60479 287 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 KATNA1O75449 491 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 RPS6KA5O75582 802 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms