RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 NAPAP54920 295 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 POLR2FP61218 127 aaKnown RBP5.65□□□□□ -1.51
LRRC49-221ENST00000560107 ACTN3Q08043 901 aaPredicted RBP5.65□□□□□ -1.51
LRRC49-221ENST00000560107 DDR1Q08345 913 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 UBE4AQ14139 1066 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 NONOQ15233 471 aaKnown RBP eCLIP5.65□□□□□ -1.51
LRRC49-221ENST00000560107 NAB2Q15742 525 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 SLC9C1Q4G0N8 1177 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 SBK1Q52WX2 424 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 MEI1Q5TIA1 1274 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 GALNT17Q6IS24 598 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 UNC13DQ70J99 1090 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 YTHDF3Q7Z739 585 aaKnown RBP5.65□□□□□ -1.51
LRRC49-221ENST00000560107 DGKHQ86XP1 1220 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 TBC1D5Q92609 795 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 INPP4AQ96PE3 977 aaPredicted RBP5.65□□□□□ -1.51
LRRC49-221ENST00000560107 PNMA5Q96PV4 448 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 VCPKMTQ9H867 229 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 KANSL2Q9H9L4 492 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 TMBIM4Q9HC24 238 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 KIAA1551Q9HCM1 1747 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 KLC4Q9NSK0 619 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 TFCP2L1Q9NZI6 479 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 RNF14Q9UBS8 474 aa5.65□□□□□ -1.51
LRRC49-221ENST00000560107 A0A087X0T9 212 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 A0A0G2JS52 829 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SMCO2A6NFE2 343 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 FAM107AO95990 144 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SERPING1P05155 500 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 FAM228BP0C875 321 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 HSD17B3P37058 310 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 HSPA9P38646 679 aaKnown RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 GNAQP50148 359 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ERVK-9P63128 1117 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 HLTFQ14527 1009 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PTPROQ16827 1216 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 KIAA0753Q2KHM9 967 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 CCDC40Q4G0X9 1142 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PARP10Q53GL7 1025 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 FAM83BQ5T0W9 1011 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SFMBT2Q5VUG0 894 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 C6orf89Q6UWU4 347 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 CCDC13Q8IYE1 715 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 GUF1Q8N442 669 aaKnown RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 USP38Q8NB14 1042 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 TBCKQ8TEA7 893 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ZKSCAN4Q969J2 545 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 CCDC97Q96F63 343 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 LSM14BQ9BX40 385 aaKnown RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 TAF1DQ9H5J8 278 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 MKNK2Q9HBH9 465 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 STX8Q9UNK0 236 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 MINPP1Q9UNW1 487 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 GRID2IPA4D2P6 1211 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PALM3A6NDB9 673 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 KCNK3O14649 394 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 BACH1O14867 736 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 RASSF9O75901 435 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 FGFR1OPO95684 399 aaKnown RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 TMOD1P28289 359 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ECHS1P30084 290 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ATP6V1AP38606 617 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SMTNP53814 917 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 LRRC63Q05C16 580 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 UAP1Q16222 522 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 QPCTQ16769 361 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SPRED3Q2MJR0 410 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ZNF280DQ6N043 979 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 KRT25Q7Z3Z0 450 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 NEK8Q86SG6 692 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 DNAAF5Q86Y56 855 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SLC44A5Q8NCS7 719 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 LARP4BQ92615 738 aaKnown RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 CYFIP2Q96F07 1278 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 NUDT12Q9BQG2 462 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 EDEM3Q9BZQ6 932 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ZMYND12Q9H0C1 365 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 NEUROG2Q9H2A3 272 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 GOLPH3Q9H4A6 298 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 GPBP1L1Q9HC44 474 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 VAT1LQ9HCJ6 419 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PLCB1Q9NQ66 1216 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 TMEM260Q9NX78 707 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 CEP72Q9P209 647 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 BIN2Q9UBW5 565 aaPredicted RBP5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ADAMTS1Q9UHI8 967 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ATP6V0A2Q9Y487 856 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PCDHGC5Q9Y5F6 944 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 SCN7AQ01118 1682 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 ABCB11O95342 1321 aa5.64□□□□□ -1.51
LRRC49-221ENST00000560107 PVALEFA0A1B0GWK0 134 aa5.63□□□□□ -1.51
LRRC49-221ENST00000560107 GOLGA6L10A6NI86 522 aa5.63□□□□□ -1.51
LRRC49-221ENST00000560107 KLRF2D3W0D1 207 aa5.63□□□□□ -1.51
LRRC49-221ENST00000560107 H0YGN5 161 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms